Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele28g0099 ATGAGTGGTTTCGCATATAGACCCTGTAAGTCAATGGACGGTAATCAAGGTATCGACCCAGCCTGTGTTGGTACTGCTACTGGTATGCAACGAATCAGCTCCGCATTTGTTTCCTCTTCGGGTGCTACTCCGAGGCCACAAAACCGATTCAATGCTCCCAGTCCCAATTTCAATGCCTCTCAAATGGGCGCGTCTGCGTTTCTGATGCAACAAAAATTGAGTCCCGAGAATCTGAAACCTGGCATACCTCCCTCCCGCCCTAATATCCCAACTTCATCGCATTATCCCCAAACTTCAGAGTTCCAATTGGCTCCCCAGCAATTACGTTCTCCGATCATGAGACCGCCCTCTTCCCATTCACGGTCTTTGTCTCAACAGTCATTTTTTTCCCCGGATTGCTTGCCTCCACTGAGTCCTTCACTTTATTGTGAACCCTTGGCGACCCCTCTTTCTAACTCGATTTCCACAGACGTGTCTATGGAAGAAAGTGTGGTTAGCTCTCACGGACCTGGCATTTCTATGCCCATCAATAGGGATCACGCCTTTCAGGCTGGTCCTAGTGTTCTTCCTCATAAAGGACACAGGCGCTCCAGCAGTGATACTCCATTAGGAATCTCTGGCTTCATTGAATCTTCTCCTCAGTTGGTTCCCTCTCCTACTTGGATGAATTTGGACAGTTCAATTTCTAGAGGAGAAAGCTCAGGATTGGAGAAGCCAATTCAGTTGGTAAGAAAGGAGCCAAAAAAGGAAGAGGGTCGTGCTGATTGTTACAATGCAAAACCTATGATTGAGAGGAAAGAGGATGTGATGGATGATTTGATCAGCTTGTATATGAATTTGGACAACTTTGATAATGTGAACTTATCTGGTGCGGAAGAATCAAAGACTTTTGAAAGCAGTGATAATGAAGTTGAGAGTCTCATAAGTGGAAAAACAACCTCTACACAAGGGGCAACTTCGAGCTTTGCTGAGGAAAGGAGGGAAGGAATCAAGAGGAGTTCTAATGGGGACATTGCACCAGGTTCCCGACATCGGAGAAGTTTTTCCTTGGATAGTTCTATAGGAAATTTGCATATTGGAGATGAGTCGCCAAAGCTTCCTCCTTTGGGGAATGGAGTTGGTCAGCGCTCTCCTAGCAATTCAGCAGATGGTAAAACATTTGAAAGCGACATGGAGTTGAGAAATGGTGAATTCACTGAACTGGAGCTTAAAAAAATAATGGAAAGTGATAAGCTTGCTGAGATTGCTTTGTCAGATCCCAAGCGTGCAAAAAGAATATTGGCTAATCGTCAATCAGCTGCTCGATCCAAGGAGCGGAAGGTGCAGTACATTGCTGAACTGGAGCACAAGGTGCAAACTCTTCAGTCAGAGACAACCACAATGTCTACTCAATTTACCAAATTGCAGAGGGATAACTCACAGCTTAAAAGCGAGAACAGTGAATTGAAATTCAGGCTTCAAGCCATGGAACAACAGTCCCGACTGAAAGATGCTCTGAACGAGACCTTAACTGCTGAAGTCCAGCGTTTGAGGCTTACCGTCACGGAACTTGGTGGAGAGTCTATTCTCTCGGGTCGCATAGCTCGCCAACGTGCTATTAATCAACAAAGTTTCCAATTGCAACATGAGCAGCCTGGCCAGCTTAAACGATCACAAATGCAAAATCAGTCACATGAGGAGACCCGGACTCAGTCGCACTAG 1701 0.4574 MSGFAYRPCKSMDGNQGIDPACVGTATGMQRISSAFVSSSGATPRPQNRFNAPSPNFNASQMGASAFLMQQKLSPENLKPGIPPSRPNIPTSSHYPQTSEFQLAPQQLRSPIMRPPSSHSRSLSQQSFFSPDCLPPLSPSLYCEPLATPLSNSISTDVSMEESVVSSHGPGISMPINRDHAFQAGPSVLPHKGHRRSSSDTPLGISGFIESSPQLVPSPTWMNLDSSISRGESSGLEKPIQLVRKEPKKEEGRADCYNAKPMIERKEDVMDDLISLYMNLDNFDNVNLSGAEESKTFESSDNEVESLISGKTTSTQGATSSFAEERREGIKRSSNGDIAPGSRHRRSFSLDSSIGNLHIGDESPKLPPLGNGVGQRSPSNSADGKTFESDMELRNGEFTELELKKIMESDKLAEIALSDPKRAKRILANRQSAARSKERKVQYIAELEHKVQTLQSETTTMSTQFTKLQRDNSQLKSENSELKFRLQAMEQQSRLKDALNETLTAEVQRLRLTVTELGGESILSGRIARQRAINQQSFQLQHEQPGQLKRSQMQNQSHEETRTQSH 566
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele28g0099 566 Coils Coil 472 492 - -
Lele28g0099 566 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 419 482 IPR004827 GO:0003700|GO:0006355
Lele28g0099 566 MobiDBLite consensus disorder prediction 75 100 - -
Lele28g0099 566 MobiDBLite consensus disorder prediction 294 322 - -
Lele28g0099 566 Coils Coil 437 457 - -
Lele28g0099 566 Gene3D - 419 481 - -
Lele28g0099 566 CDD bZIP_plant_RF2 422 472 IPR044759 GO:0003700|GO:0006355
Lele28g0099 566 SMART brlzneu 417 481 IPR004827 GO:0003700|GO:0006355
Lele28g0099 566 MobiDBLite consensus disorder prediction 534 566 - -
Lele28g0099 566 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 116 561 - -
Lele28g0099 566 SUPERFAMILY Leucine zipper domain 421 477 IPR046347 GO:0003700|GO:0006355
Lele28g0099 566 Pfam bZIP transcription factor 421 479 IPR004827 GO:0003700|GO:0006355
Lele28g0099 566 MobiDBLite consensus disorder prediction 110 129 - -
Lele28g0099 566 MobiDBLite consensus disorder prediction 37 57 - -
Lele28g0099 566 MobiDBLite consensus disorder prediction 190 211 - -
Lele28g0099 566 MobiDBLite consensus disorder prediction 294 387 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele28g0099 Lele-ChrLele28 559765 562908 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele28g0099 29 516 bZIP Transcription Factor Family AT4G38900 44.423 2.07e-100 313
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Lele28g0099 bZIP_1 8.3e-11 CL0018
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g0089 25 531912 534991 Lele28g0099 28 559765 562908 hybridization
Lele26g0098 26 549821 552903 Lele28g0099 28 559765 562908 hybridization