Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele28g0098 ATGGGTAAATCTATTTCCTGCTTCAAATTAATCGCATGCGGCAATGATGCGGCCGACGGCAACGACGATTACCAAGTGTCTGAGATCAAAGATTCGAGTGACAAACGAGGTTGGAGTTTCCGAAAAAAATCTGCAAGGCATCGTGTGCTTAGCAATTCTGTAATAACAGATACCCCTTCTTCAGCAAATAAGGAGAGTTCAGAATGTGCTAGTATCAATTTCCAACGATCAACTGAAACAAATATTGCTGAGAAGAGCCACACATCAAATTACCCTGATGAGAAACCCCCTCTATTATCCATGGAAAACTCACAATTATCTGAAACAGCTGTTACTGATACTGAGAGCAAGGTGGATTTATCTGAAACAGTTGTTAATGAAACTGAGAGTAAGGTGGATTTTTCTGAAACAGTTGTTACTGAAACTGAGAGTAAGGTGGTTGCCAATCCACCGGAGTCTGTGGTTATCACCATCCAAGCTTCCATCAGAGGGTTCATGGCTCAGGGAGCCTTGCTAAAGCTTAAGAATGTAGTGAAGTTGCAAGCTGCTGTTCGTGGGCATTTGGTTCGGAGGCATGCTGTAGGAACCCTGCGTTGTGTTCAAGCCATAGTTAAATTGCAGCTCCTCGTGCGAGCTCGTCATGCTCAGCAGTTGTATCAAGCTAAGCGTGGCAAACTTAATGGCTCAGAAATTTTGGGTAATGGAAATCATGTGAGCAAGTCAAGTGTGAAGTCCACTTCCATGGAGAAACTGCTTAGCAATCGGTTTGCTCATCAGCTGTTGAAATCCACACCAAAAAACAAACCAATCCGTGTCAAATGTGATCCTTCCAAAGCTGATTCTGCTTGGAAATGGTTGGAGAGATGGATGTCTGTTTCCTCATTGGATTCTGCAGAGTCTAAAATAGCAAGTTCAATGGTGGAGCAATCAGACAACAATGAATCTAGCTCTTCTCTGTCTCTATTAGAAACTGGGCTTCTGTGTGAAGTTTTTTGTCAGTCAGATGACTCAAAGCTCTCTGTTGAGGACTCTGTGGTACCTTCAGAGGTTGAAGAGAAAGTGACTACTCATGATACAGGAAACTTAAGCTTCGAAGCAATCCATTCTACGTCTATTGCCAAAGATGATTTGGAACAGTATCAGCCTGAAATGACAATTACCTTTGATGCTAAAGTAATCCCAGAAGAAATTGATTCGCAGCAAAATAAAAGTGTGACATCAGATGCAATTGCTCCTCAGGAGCTTAGTTCTCTTCCTGAGAAACCTGAAATTGACAGTGAACAGCCCAAAAGATCTATGAAAAGATTTGCCTCTGAGCAACTGGAGACTGAGGGAACCAAATTTGGGTATGGATCAAGAAAGGCCAGCAATCCAACATTGATTACTGCAGAGTCTAAATTTGAAGAGCTGAGTACAACAGCAAATTCAGGTAGGTCAACCAGTTTGTCTAATAAAGATGCAATGGTTGAAGCGCATGGAGACCCCATTTCTGTTGGCACAGGCACTGCATTTGGGTCAAAAGAGCTCTTATTGGAGAATTCTGCTCCCTTTCCTTCCAGGATTGGTGGCTCTGAATGTGGTACTGAACTCTCTATTTCTTCCACTCTTGATTCACCAGACATATCTGAGATTGGCGCTACAGAAAATGAGCCTGAAGCCAAAGATTTATCAGAAGGGATTCGTAATCCTAACAATGTGATAAATCATGAGGTTGAGGCCAATGTTTTTTGTACCACACCAGCTTGTGATTTACCCAGCTCTGAACTGGATCAGCCTGAGACTGCCAATGACGAAGATATCAATAGCAAATCAGTACATTCAGCAGTAGTTGTTGATCTCAAAGAGCCAGCTCTTAAGTCTGAGAAAAACGTTTCTGATCTGCAAAGAGAACAAACGGAGTCTGCTGTGCAAGATCTCAGAGCATCTCCTGAAGCCTTACCCAGAAGCCATGTAACCGTCCCTGAATCTCAAGGAACGCCTTCGAGTCAGGTATCAGTGAAATCTAAAGAGAGAAAACCCGAGAAGACTGGATCAGGATCGACAAACAGACAAAGGATTCTGTCAGCTGGTAATAAATCACCTGCGAATGCAACTCCTGATTCAGGATCTAGAGGTAGTAGGGAACAGCTGCCTAAAGATCAGGGGAGTGGGAAGAGGCGCAATTCCTTTGGCTCAGCGAAAACTGATCACGGTCATCAAGAATCCAGAGATAATAGTAACAACAGTTCTCTTCCTCGTTTCATGCAAGCCACAGAATCTGCCAGGGCCAAGATTAATGCTAATAATTCTCCACGATCAAGTCCAGATGTGCATGACCGCGAGGTAAATGTTAAGAAGAGACACTCCTTGCCTGGTACAAGTGCAACTGGTAGGCAGGTTTCACCACGCATCCAACGCTCAATTTCTCAGGCACAGCAGGGTACGAAAGGACAAGGTTCACATCCTTCCCATGAGAGGAAGTGGCAGAGGTGA 2472 0.4369 MGKSISCFKLIACGNDAADGNDDYQVSEIKDSSDKRGWSFRKKSARHRVLSNSVITDTPSSANKESSECASINFQRSTETNIAEKSHTSNYPDEKPPLLSMENSQLSETAVTDTESKVDLSETVVNETESKVDFSETVVTETESKVVANPPESVVITIQASIRGFMAQGALLKLKNVVKLQAAVRGHLVRRHAVGTLRCVQAIVKLQLLVRARHAQQLYQAKRGKLNGSEILGNGNHVSKSSVKSTSMEKLLSNRFAHQLLKSTPKNKPIRVKCDPSKADSAWKWLERWMSVSSLDSAESKIASSMVEQSDNNESSSSLSLLETGLLCEVFCQSDDSKLSVEDSVVPSEVEEKVTTHDTGNLSFEAIHSTSIAKDDLEQYQPEMTITFDAKVIPEEIDSQQNKSVTSDAIAPQELSSLPEKPEIDSEQPKRSMKRFASEQLETEGTKFGYGSRKASNPTLITAESKFEELSTTANSGRSTSLSNKDAMVEAHGDPISVGTGTAFGSKELLLENSAPFPSRIGGSECGTELSISSTLDSPDISEIGATENEPEAKDLSEGIRNPNNVINHEVEANVFCTTPACDLPSSELDQPETANDEDINSKSVHSAVVVDLKEPALKSEKNVSDLQREQTESAVQDLRASPEALPRSHVTVPESQGTPSSQVSVKSKERKPEKTGSGSTNRQRILSAGNKSPANATPDSGSRGSREQLPKDQGSGKRRNSFGSAKTDHGHQESRDNSNNSSLPRFMQATESARAKINANNSPRSSPDVHDREVNVKKRHSLPGTSATGRQVSPRIQRSISQAQQGTKGQGSHPSHERKWQR 823
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele28g0098 823 MobiDBLite consensus disorder prediction 679 722 - -
Lele28g0098 823 MobiDBLite consensus disorder prediction 399 438 - -
Lele28g0098 823 ProSiteProfiles IQ motif profile. 152 179 IPR000048 GO:0005515
Lele28g0098 823 MobiDBLite consensus disorder prediction 652 666 - -
Lele28g0098 823 MobiDBLite consensus disorder prediction 737 766 - -
Lele28g0098 823 MobiDBLite consensus disorder prediction 782 812 - -
Lele28g0098 823 Pfam Protein of unknown function (DUF4005) 733 806 IPR025064 -
Lele28g0098 823 Gene3D - 152 198 - -
Lele28g0098 823 MobiDBLite consensus disorder prediction 619 823 - -
Lele28g0098 823 MobiDBLite consensus disorder prediction 399 413 - -
Lele28g0098 823 MobiDBLite consensus disorder prediction 528 561 - -
Lele28g0098 823 Pfam IQ calmodulin-binding motif 175 192 IPR000048 GO:0005515
Lele28g0098 823 ProSiteProfiles IQ motif profile. 173 202 IPR000048 GO:0005515
Lele28g0098 823 MobiDBLite consensus disorder prediction 420 438 - -
Lele28g0098 823 MobiDBLite consensus disorder prediction 528 542 - -
Lele28g0098 823 PANTHER IQ-DOMAIN 5-RELATED 1 790 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele28g0098 Lele-ChrLele28 549684 555007 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele28g0098 125 823 IQD Protein Family AT1G19870 37.324 2.87e-103 330