Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele28g0094 ATGGGTTCTGTTTCTCTTAAAATAGGGGATGGCACCGCCAGATTCAAGAGAGCCACTTTTTGTTCTCCGGCAGTCAACATTCTCATGATCTTCTGTGTTATCACTACCAATCTTTTTGCCCTTTATGCTTTCACTGCTTCCCCCAAACACCATAGCAGCCACCTGCTTCTCCATACTCAAAAGAACTTCTCTCTCATTTCTGAACAGGTCTCTCTGATACTGAGAGAGATCGATTCGTCTCAGAAAAAATTGGCCCAGATGGAGAAGGAGCTTCTTGGCTATGAAAATGTTGACCTTTCCAGACCTAATATCGCTAGCGAACTTAAACTCTATCTCCAGCACCACCAGCTCCCACTGGGCAAAGATTCGAGAACTGGGATCACTGAAATGGTCGCCTCTGTTGGTCATTCCTGTGAGAAATCTGCGGATTTATTGTCTCAATACATGAATTACAAGATAGCTGGACCTTGCCCCGATGATTGGAGTTCAGCGCAGAAACTGATCTTGCGCGGATGTGAGCCTTTACCGAGGAGGAGGTGCTTTGCTAAATCTGTTTCTAAGGTAGATCTTTATCCTTTTCCCATTTCCCTTTGGAAACCTGTGGGTAATAAGACTGTTAACTGGAGTGGCCTGGGTTGTAAGAATTTTGAGTGTTTTAATGGTAAGAAATTGGGTAGAGATTGCATTGGTTGCTTTGATTTGGTTAATGGCTACGAGAATCAGAGATACGTGAAGGCTCGAGGTAAGAATGATTTTGTCGTTGACGATGTGTTAGCATTGGCAAGTGGAGGGATAAGAATAGGGCTTGACATTGGAGGTGGGTCCGGATCCTTTGCGGCTAGAATGGCCGATAGGAACGTCACCGTGATTACCAACACTCTGAATATAGACGCACCCTTCAGCGAATTCATTGCTGCAAGAGGGCTTTTTCCTCTGTTCTTAAGCTTAGATCACAGGTTCCCATTCTACGACAATGTGTTTGATTTGGTTCATGCGTCGAGTGCCTTGGATGTTGGAGGGAAGCCTGAGAAACTGGAGTTTTTAATGTTTGACATTGATCGAATTTTGCGTGCCGGTGGGTTGTTTTGGCTGGATAATTTCTACTGTGCCAATGATGAGAAGAAGAAGGCCTTAACTCGTTTAATCGAACGTTTTGGATATAAGAAGTTGAAATGGGTTGTGGGAGAGAAGGTTGATAGTGTGGGATCAGGCAAATCTGAAGTCTTATCTGCTGTGCTTCAGAAGCCTGTAAGAGTGTAA 1260 0.4429 MGSVSLKIGDGTARFKRATFCSPAVNILMIFCVITTNLFALYAFTASPKHHSSHLLLHTQKNFSLISEQVSLILREIDSSQKKLAQMEKELLGYENVDLSRPNIASELKLYLQHHQLPLGKDSRTGITEMVASVGHSCEKSADLLSQYMNYKIAGPCPDDWSSAQKLILRGCEPLPRRRCFAKSVSKVDLYPFPISLWKPVGNKTVNWSGLGCKNFECFNGKKLGRDCIGCFDLVNGYENQRYVKARGKNDFVVDDVLALASGGIRIGLDIGGGSGSFAARMADRNVTVITNTLNIDAPFSEFIAARGLFPLFLSLDHRFPFYDNVFDLVHASSALDVGGKPEKLEFLMFDIDRILRAGGLFWLDNFYCANDEKKKALTRLIERFGYKKLKWVVGEKVDSVGSGKSEVLSAVLQKPVRV 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele28g0094 419 Gene3D Vaccinia Virus protein VP39 237 406 IPR029063 -
Lele28g0094 419 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 249 389 IPR029063 -
Lele28g0094 419 Pfam Putative S-adenosyl-L-methionine-dependent methyltransferase 261 389 IPR004159 GO:0008168
Lele28g0094 419 Coils Coil 70 97 - -
Lele28g0094 419 PANTHER S-ADENOSYL-L-METHIONINE-DEPENDENT METHYLTRANSFERASE SUPERFAMILY PROTEIN-RELATED 24 418 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele28g0094 Lele-ChrLele28 536678 537937 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g0085 25 505533 506792 Lele28g0094 28 536678 537937 hybridization
Lele26g0096 26 525208 526467 Lele28g0094 28 536678 537937 hybridization