Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele28g0090 ATGTCTAGGGAGACTAGGTATAGAGCAGAGGGTACTACTCGGTCACTTTTGAGATCTGAATTAGGAGAATGTGAAGCGTACGTGATGAACATTTGGATGGGGGAAGCTCGAGTGCCATTCCCTGTCGTGGCGGCAAAGAAATTCCTGAACATACTCAAGACTCGCGGCGAAGATAATGCTCATCAAGTAAACTCCGTATCCGTTGAAAATTTAGGCTGTCCCGTGCTGTGTTGCTTTACCGACACAGTTGCAAATTTTGAGATGGACCGGCGCTGGCCCTGGAAGAAAAAATCATCTGACAAGGCAGTGATTGACAAAGCAGCTGCTACACTGGACACTGTTAGTGCCGTCTCCCAGGGCAATCAGGATAACTACAAAAAACCAAACTATGTCCAAATTTCTGTGGAGTCATATTCACATCTGACTGGTTTGGAGGATCAAGTGAAGACATATGAGGAAAAAGTTCAGACTCTAGAGGATGAGATCAAGGAGCTGAGTGATAAGCTGTCAGCGGCAAATTCAGAGATGACAACCAAGGAAAACCTTGTAAAACAACATGCAAAAGTAGCTGAAGAAGCTGTCTCAGGATGGGAAAAGGCCGAAGCAGAAGCTTTGTCATTGAAGAATCATCTAGAATCTGTCACTCTTGCAAAACTCACTGCTGAGGATCGTGCATCACATCTAGATGGTGCTCTTAAAGAGTGCATGCGACAGATAAGAAACCTGAAGGAAGAACATGAAGAGAAAATACAAGAAGTTGCTCTCTCTAAAGCCAGGGAATTGGACAAGATTAAGGGGGAGCTTGAGGCAAAGATTGATAACTTAGAACAGGAACTCCTAAGGTCAGCTGCTGAAAATGGGGCGCTTTCAAAGTCCTTGCAGGAGCGCTCCAACATGCTAATAAAAATAAGTGAAGAAAAGGCTCAAGCTGAGGCTGACATTGAGCTTCTGAAGGGCAACATAGAATCATGCGAAAGGGAAATCAATTCACTTAAGTATGAACTTCATCTTGTTTCCAAAGAGCTTGAAATTCGCAATGAAGAAAAGAACATGAGTATGAGATCTGCGGAAGCTGCTAACAAGCAGCATATGGAGGGGGTCAAAAAAATTGCCAAATTAGAGGCAGAATGCCAAAGATTGCGTGGTCTGGTGCGGAAAAAGTTACCCGGTCCTGCAGCACTTGCACAGATGAAGCTAGAAGTTGAGAGTCTTGGCCGAGACTATGGAGAAAATCGACTAAGGAAGTCTCCTGTCAAGCCTTCTAGTCCTCACATGTCTCCTCTGCCTGACTTCTCCTTAGAGAATGCACAGAAATTCCAGAAAGAGAACGAATTTCTTGCGGAGCGTTTATTGGTAATGGAAGAAGAAACTAAGATGCTCAAAGAAGCTTTGGCTAAACGTAACTGTGAATTGCAGGCCTCGAGAAGCATGTGCGCAAAAACCTTAAGCAGGCTTCAAAGCTTGGAAGCTCAACATCAAACATGTAACCAGCAAAAAGGATCTCCAAAATCCATAGCCCGGATGACCCATGAAAGTATTTATAGTCACAATGCAAGCTATGCACCAAGTATAACCTCCATATCTGAAGATGGAAACGATGATGCATTAAGCTGTGCTGAGTCTTGGGCTACAGCATTAATCTCTGAGCCCTCCCAATTTCGAAAGGAAAAGAATACTGTGAAATCAAGCAAACCTGAATCCACAAATAAGTTGGAGTTGATGGATGATTTTCTGGAGGTGGAAAAGTTGGCTCATCTATCAAACAATTCTAATGAAGATACCTCTGTTTCAATTTCTTCGAACAAGACATCTGAAGTTGTGACCGATGATGTAATGAACATCAATAATGGCAGAGATGATTCTTCTGATGAACAGATTGTTTCAAATCCATTGTCAAATCTGGAGTCTTCTGTTGCAGAGTTGTCAGTAACTGATCCTGGAGCTGATGTTGATGGGTTTTCATTGACAGAGCTCCAATCAAGAATATTGTCAGTGTTCAAGTCCATGTCTAAGGATGCTGATAAAGGAAAGGTCCTGGAGGATATTAAACATATTCTGGAGGATGAACAAGACACTTCTGTCCATCACTCTTCAGGTCGCATTTCTCAGATTGTCCAACCGCTCCAGCCTTCTGATTCTCCATGTGATAGGCATGTTAATCCTGAAGATGCTGGCTTAAGTGTTGAAAAGGATTCCACTTCATCCCAGCAAGCAACAGAATGTGTGAATATAACTTCAAATATAGAAGCTGCAATTTCTCAGATTCATGACTTTGTATTATTCCTAGGCAGAGAAGCTATGGCAGTTCATGACACATCTTGTAATGTAGATGGAATGAGCCAAAAGATTGAGGAGTTCTCTGTCACTTTTAATAAAGTTCTACACAGTGAAGCAAGTTTGTCACTATTTGTTCTTGACCTGTCTTGTGTTTTAGCAAAAGTGAGCGAGTTCAGATTTAATGTCCTTGGCTACAAGGGTACAGAAGCTGAAACTAACAGTCCTGATTGCATCGACAAGATTGCCTTGGCAGAAAATAAGTTACCTCGAGATGGTTCACCTGGAGACAGAGATCAAAATGGTTGTTCTCATAATCTAAATCCCTGTTCTGATCCTGAGGTTCCTGATGATGGAAATCTTGTCTCGGCCTATGAATCAAATGCTACATTCAAAAAATTCTCACTGGAGGAGTTTGAAGAGTTGAAATTAGAGAAAGAGAAAGCAGAAATGGATCTGTCAAGATGCACTGAAAGTCTTGAAACGACAAAGTCTCAGTTACTGGAAACTGAGCAACTTCTGGCGGAAGTTAAATCACAATTGGCTTCTACTCAAAAATCGAATAGCTTGGCTGATACACAGCTGAAGTGTATGGCAGAGTCATACAGGTCACTCGAAACACGTGCCCATGAGTTAGAAACTGAGTTAAATCTTTTGCGAGTCAAGACTGAAACTCTGGATAATGAACTTCAAGATGAAAAGAGGGGTCATGAAGATGCTTTGGCGAAGTGTAAGGAGCTAGAAGAGCAATTGCAAAGGAACGAGAGCTCAGAAGCTGATAGTGACCAGAAGACCAAGCAGGAGAGGGATTTGGCAACTGCTGCTGAAAAGCTAGCCGAGTGTCAGGAAACCATTTATCTTCTTGGCAAGCAGTTGAAAGCTTTGCATCCTCAAACAGAGCACAACGAATCTCCAAACGGTGAAAGAAGTCCGAAGGTTGGAGGCTTCCCGGAGGATGAACCTACAATTAGTGACCCAAATTTGCAAGAATTAGATCAGGCCGAGTTGGAGAATGCTACTTCTGCATATATGCAGAAATTAGGAGGGGGGTCGCCTCTGCACTTCTCCAACGCCGTCTACGGTCCATCAGACAATGAAGCAAACCTTCCGGACAGACCTACGGGGAGGCCTCCAAAACATAGGCCTACGAAGTCAACCTCATCATCTGCCTCCTCCACTCCTGCACTAGAGAAACACGCACGAGGCTTCAGTAGATTCTTTTCATCCAAGGGAAAGAACGGTCACTGA 3522 0.4316 MSRETRYRAEGTTRSLLRSELGECEAYVMNIWMGEARVPFPVVAAKKFLNILKTRGEDNAHQVNSVSVENLGCPVLCCFTDTVANFEMDRRWPWKKKSSDKAVIDKAAATLDTVSAVSQGNQDNYKKPNYVQISVESYSHLTGLEDQVKTYEEKVQTLEDEIKELSDKLSAANSEMTTKENLVKQHAKVAEEAVSGWEKAEAEALSLKNHLESVTLAKLTAEDRASHLDGALKECMRQIRNLKEEHEEKIQEVALSKARELDKIKGELEAKIDNLEQELLRSAAENGALSKSLQERSNMLIKISEEKAQAEADIELLKGNIESCEREINSLKYELHLVSKELEIRNEEKNMSMRSAEAANKQHMEGVKKIAKLEAECQRLRGLVRKKLPGPAALAQMKLEVESLGRDYGENRLRKSPVKPSSPHMSPLPDFSLENAQKFQKENEFLAERLLVMEEETKMLKEALAKRNCELQASRSMCAKTLSRLQSLEAQHQTCNQQKGSPKSIARMTHESIYSHNASYAPSITSISEDGNDDALSCAESWATALISEPSQFRKEKNTVKSSKPESTNKLELMDDFLEVEKLAHLSNNSNEDTSVSISSNKTSEVVTDDVMNINNGRDDSSDEQIVSNPLSNLESSVAELSVTDPGADVDGFSLTELQSRILSVFKSMSKDADKGKVLEDIKHILEDEQDTSVHHSSGRISQIVQPLQPSDSPCDRHVNPEDAGLSVEKDSTSSQQATECVNITSNIEAAISQIHDFVLFLGREAMAVHDTSCNVDGMSQKIEEFSVTFNKVLHSEASLSLFVLDLSCVLAKVSEFRFNVLGYKGTEAETNSPDCIDKIALAENKLPRDGSPGDRDQNGCSHNLNPCSDPEVPDDGNLVSAYESNATFKKFSLEEFEELKLEKEKAEMDLSRCTESLETTKSQLLETEQLLAEVKSQLASTQKSNSLADTQLKCMAESYRSLETRAHELETELNLLRVKTETLDNELQDEKRGHEDALAKCKELEEQLQRNESSEADSDQKTKQERDLATAAEKLAECQETIYLLGKQLKALHPQTEHNESPNGERSPKVGGFPEDEPTISDPNLQELDQAELENATSAYMQKLGGGSPLHFSNAVYGPSDNEANLPDRPTGRPPKHRPTKSTSSSASSTPALEKHARGFSRFFSSKGKNGH 1173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele28g0090 1173 MobiDBLite consensus disorder prediction 696 710 - -
Lele28g0090 1173 MobiDBLite consensus disorder prediction 1007 1029 - -
Lele28g0090 1173 Coils Coil 141 182 - -
Lele28g0090 1173 MobiDBLite consensus disorder prediction 690 732 - -
Lele28g0090 1173 PANTHER FILAMENT-LIKE PLANT PROTEIN 4 88 1168 - -
Lele28g0090 1173 Coils Coil 436 456 - -
Lele28g0090 1173 Coils Coil 300 376 - -
Lele28g0090 1173 MobiDBLite consensus disorder prediction 1054 1173 - -
Lele28g0090 1173 MobiDBLite consensus disorder prediction 1138 1153 - -
Lele28g0090 1173 MobiDBLite consensus disorder prediction 1084 1098 - -
Lele28g0090 1173 Coils Coil 953 1042 - -
Lele28g0090 1173 Coils Coil 890 938 - -
Lele28g0090 1173 Pfam Filament-like plant protein, long coiled-coil 179 1059 IPR008587 -
Lele28g0090 1173 Coils Coil 225 285 - -
Lele28g0090 1173 MobiDBLite consensus disorder prediction 847 876 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele28g0090 Lele-ChrLele28 497956 509370 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele28g0090 28 497956 509370 Lele01g1200 01 7178056 7182198 CCT
Lele28g0090 28 497956 509370 Lele02g1469 02 18899628 18903594 CCT
Lele28g0090 28 497956 509370 Lele03g1214 03 7145268 7149235 CCT
Lele28g0090 28 497956 509370 Lele04g1452 04 19747213 19752857 CCT
Lele25g0080 25 464926 469307 Lele28g0090 28 497956 509370 hybridization
Lele26g0091 26 489035 493917 Lele28g0090 28 497956 509370 hybridization