Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele28g0089 ATGGCTCTGAAGAAACCCAGCAGACTCCCTCAGACGGCATTTCTGAAGCAAATTGTAAAGAGATGCTCGAGCTTAGGGAAGAAACGAGGGTATGATGAAGAAGGCCTGCCTATGGACGTGCCCAAGGGTCACTTCGTCATATATGTTGGAGAAAACAGAAGTAGATACGTTGTCCCAATATCATTTCTGAGCCGCCCTGAGTTCCAAAGCCTTCTCCTTCGAGCCGAAGAGGAGTTTGGCTTTGATCACGACATGGGTCTCACAATCCCTTGTGAGGAAGACTCCTTTGAGTCTCTCACCTCCACTCTCAGATGA 315 0.4857 MALKKPSRLPQTAFLKQIVKRCSSLGKKRGYDEEGLPMDVPKGHFVIYVGENRSRYVVPISFLSRPEFQSLLLRAEEEFGFDHDMGLTIPCEEDSFESLTSTLR 104
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele28g0089 104 Pfam Auxin responsive protein 27 102 IPR003676 GO:0009733
Lele28g0089 104 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 37 103 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele28g0089 Lele-ChrLele28 494872 495186 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele28g0089 37 99 Calmodulin-binding Proteins AT3G43120 52.381 3.89e-19 75.5