Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele28g0063 ATGTTAGCGTGGAGGGATTCCTCTATAAAAAGCCCATCAACACCCTCTCCTTGCATCGCCATTCCAAAGTATCTTAGAGACAAGTGTGTGGCGGTGTGCTTCTCAAGTTCTTTGCTATGGCCAACACTACGCCCAATCACATACAGACCGTTTCTGGATGGGCTGCTCACGATTCTTCTGGCAAAATTACCCCTTTCACTTTTAAACGACGGTACTCTCTTCCTCCTTCCTCCCTCTGTACTGGAGAACGGCGCTAACGACGTCACTATACGGATCTTGTACTGTGGTATCTGCCACACTGATCTTCACTACGCTAAAAATGACTGGGGGATCACCATGTATCCTATAGTTCCCGGGCACGAGATCGTAGGGGTGATAACGAAGGTTGGAAGCGATGTGAAGGGGTTTAAGAAAGGAGACAGGGCAGGGGTGGGGTGCCTGGCTTCCTCGTGTCTGGACTGTGAATACTGCAAGAGTGATCAGGAGAACTACTGCGAACAGTTACAGTTCACATACAACGGCATCTTCTGGGACGGCAGCATCACCTACGGCGGCTACTCCGACATGATAGTGGCGGATTACAGATACGTGGTGCACATACCGGAGAACCTGAGCATGGAAGGAGCGGCGCCGCTGCTGTGTGCGGGGATAACGGTGTTCAGTCCGATGAAGGATCACGGGTTGGTGGAGAGCGGGGGAAAGAGGATAGGGGTGGTGGGGTTGGGAGGGCTGGGGCACATGGCGGTGAAGTTTGGGAAGGCGTTTGGTCACCACGTGACGGTGATAAGCAGATCGGCGGGGAAGGAGTGGGAGGCAAAGCACAGACTGGGAGCTGATGAGTTCATTGTGAGCAGCGAGGTGAAGCAAATGGAGGGAGCGAGGAGGAAGTTGGATTTCATATTGGATACGGTGTCAGGGCAGCACTCTCTGCTGCCACTGCTGGAACTACTCAAGGTCAATGGAACCCTGTTCATCGTGGGCGCCCCCAACGAGCCCTTCCAGCTGCCCGCTTTCCCTCTGATCTTCGGGAAAAGGGCGGTTAAAGGGGGCATCATAGGAGGCATCAAGGAGACGCAGGAGATGCTGCAACTTTGTGGGAAACACAACATCACTTGCGACACGGAGTTGATAAGGCCCGACCAAATCAACGAGGCCATGCACCGCCTCGCCAACAATGATGTTCGTTACCGTTTTGTCATCGACATCGCTTCTGCCTCTTCCTGA 1224 0.5351 MLAWRDSSIKSPSTPSPCIAIPKYLRDKCVAVCFSSSLLWPTLRPITYRPFLDGLLTILLAKLPLSLLNDGTLFLLPPSVLENGANDVTIRILYCGICHTDLHYAKNDWGITMYPIVPGHEIVGVITKVGSDVKGFKKGDRAGVGCLASSCLDCEYCKSDQENYCEQLQFTYNGIFWDGSITYGGYSDMIVADYRYVVHIPENLSMEGAAPLLCAGITVFSPMKDHGLVESGGKRIGVVGLGGLGHMAVKFGKAFGHHVTVISRSAGKEWEAKHRLGADEFIVSSEVKQMEGARRKLDFILDTVSGQHSLLPLLELLKVNGTLFIVGAPNEPFQLPAFPLIFGKRAVKGGIIGGIKETQEMLQLCGKHNITCDTELIRPDQINEAMHRLANNDVRYRFVIDIASASS 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele28g0063 407 Gene3D - 82 401 - -
Lele28g0063 407 Pfam Zinc-binding dehydrogenase 243 364 IPR013149 -
Lele28g0063 407 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 204 370 IPR036291 -
Lele28g0063 407 SUPERFAMILY GroES-like 80 232 IPR011032 -
Lele28g0063 407 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 119 133 IPR002328 GO:0008270|GO:0016491
Lele28g0063 407 Gene3D - 215 372 - -
Lele28g0063 407 Pfam Alcohol dehydrogenase GroES-like domain 86 199 IPR013154 -
Lele28g0063 407 PANTHER ALDEHYDE REDUCTASE 79 403 - -
Lele28g0063 407 FunFam Cinnamyl alcohol dehydrogenase 215 372 - -
Lele28g0063 407 SMART PKS_ER_names_mod 71 400 IPR020843 GO:0016491
Lele28g0063 407 CDD CAD1 84 401 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele28g0063 Lele-ChrLele28 343685 345286 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele28g0063 82 405 Monolignol Biosynthesis Gene Families AT2G21730 59.077 2.52e-133 385
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele26g0065 26 343740 345991 Lele28g0063 28 343685 345286 hybridization