Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele28g0058 ATGGGACTTGGTTTCTTCAAGGCGCTTTGCTGTAGCAACGATCATCATGAAATTCGCATAGACTCGTCGGACTCCTCTCCCGTGCGGCCTCCCAGGCAGAGGTCCAGGGAACATGAATACGACGTCGTCAAACCAGTACCTGCTTCGAATTCTAAGCCTAAACAAGCGGCTGCGCATTCGCAAGCACTAGTAGGGCCGGTGCTGGGCAAACCGTACGTGGACATAAGTATGATGTACGAACTAGAGAAAGAGCTGGGGAGAGGGCAATCGGGGGTGACATATCTGTGCACAGAGAAGACGACGGGGAGAAAGTACGCGTGCAAGAGCATAGCGAGGAGGAAGCTGACGAGGAAGGAGGAAATAGAGGACGTGCGTAGAGAGATACTGATACTGCAGCATCTGTCGGGGCAGCCAAACATTGTGGAATTCAGAGGCGCATACGAGGACCGGCAGAACGTGTACCTGGTCATGGAACTGTGCACCGGAGGCGAGCTGTTTGACCGCATCATCGCCAAAGGGAACTATTCGGAGAAGGAAGCAGCGGCGCTGTTCCGGCAGATCGTGACGGTGGTTCATGTGTGCCATTTCATGGGAGTCATGCATCGGGACCTGAAGCCTGAGAATTTCTTGATGGCCAGCGAGCACGATCACGCCCCCATCAAAGCCACCGATTTTGGACTCTCCGTCTTCATTGAGCCCGGTCTGTCCCCTCTCTTCTACCCTTTCTCTTTCATTCTTCACTTTCATATATACTTAATTGGTGGGTAG 768 0.5312 MGLGFFKALCCSNDHHEIRIDSSDSSPVRPPRQRSREHEYDVVKPVPASNSKPKQAAAHSQALVGPVLGKPYVDISMMYELEKELGRGQSGVTYLCTEKTTGRKYACKSIARRKLTRKEEIEDVRREILILQHLSGQPNIVEFRGAYEDRQNVYLVMELCTGGELFDRIIAKGNYSEKEAAALFRQIVTVVHVCHFMGVMHRDLKPENFLMASEHDHAPIKATDFGLSVFIEPGLSPLFYPFSFILHFHIYLIGG 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele28g0058 255 Gene3D Transferase(Phosphotransferase) domain 1 166 242 - -
Lele28g0058 255 SUPERFAMILY Protein kinase-like (PK-like) 79 235 IPR011009 -
Lele28g0058 255 PANTHER SERINE/THREONINE-PROTEIN KINASE 73 233 - -
Lele28g0058 255 Gene3D Phosphorylase Kinase; domain 1 81 165 - -
Lele28g0058 255 MobiDBLite consensus disorder prediction 20 60 - -
Lele28g0058 255 Pfam Protein kinase domain 79 233 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele28g0058 255 ProSiteProfiles Protein kinase domain profile. 79 255 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele28g0058 255 FunFam Calcium-dependent protein kinase 1 81 164 - -
Lele28g0058 255 ProSitePatterns Serine/Threonine protein kinases active-site signature. 199 211 IPR008271 GO:0004672|GO:0006468
Lele28g0058 255 ProSitePatterns Protein kinases ATP-binding region signature. 85 108 IPR017441 GO:0005524
Lele28g0058 255 SMART serkin_6 79 252 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele28g0058 Lele-ChrLele28 321587 322354 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele28g0058 33 234 EF-hand Containing Proteins AT1G50700 63.235 2.79e-86 263
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Lele28g0058 Pkinase 3e-43 CL0016