Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele28g0054 ATGGCTTCTATCACCAATTTCGTCGTCAAATCACCCTTCTCCCTCTCCACCCACCACCCCAAGCTCCTCCCCCTTCATTCCCGTTCTACTTTACCTTTTCTGCCGCCTCATACTCCTCCGCCACCCGCCCTCAGAACCCCCCACCACACCCGCTTCATCACAAGAGCCACGGCTGCCCCCGGTGCCGAGAAAGTTCAAAGCGACGAGAGAGTTCAAAAGGTCCACAGCATCGAAGAATTCGACCAAGCCCTTCGATCTGCCAAGGACAGACTGGTGGTGGTAGAATACGAGAGCAGGGACAGCGATGATAGCAGCAAGATATACCCTTTCATGGTGGAACTGAGCCGATCGTGCGGCGACGTGGATTTCCTTCTGGTGATGGGCGACGAATCGGAGAAGACGAGAGAGCTGTGCAGGAGAGAAAAGGTGGAGAAAGTGCCTCACTTTAGCTTCTACAAGAGCATGGAGAAGATACACGAGGAGGAAGGGATCGGTCCGGATCAGCTGATGGGAGACGTGTTATACTACGGAGATAACCACTCCGAGGTGGTACAGCTGCACAGCGGAGAGTATGTGAAGAAGCTGATAGAGGATCACAGGCCCGACCACAAGCTGATCGTCCTGGATGTCGGACTCAAGCACTGCGGGCCCTGCGTGAAGGTGTATCCCACGGTGCTGAAGCTGTCGAGGCAGATGTCTGACTCGGTGGTGTTTGCCAGGATGAACGGGGACGAGAACGACAGCTGCATGCGGTTCTTGAGGGACATGAACGTGGTGGAGGTGCCCACGTTTTTGTTCATCAGAGACGGTAAGATTAATGGGAGGTATGTGGGTTCTGGAAAAGGTGAACTTATTGGCGAAATTCTGAGGTACCAAGGGGTCCGTGTCACTTATTAG 897 0.5407 MASITNFVVKSPFSLSTHHPKLLPLHSRSTLPFLPPHTPPPPALRTPHHTRFITRATAAPGAEKVQSDERVQKVHSIEEFDQALRSAKDRLVVVEYESRDSDDSSKIYPFMVELSRSCGDVDFLLVMGDESEKTRELCRREKVEKVPHFSFYKSMEKIHEEEGIGPDQLMGDVLYYGDNHSEVVQLHSGEYVKKLIEDHRPDHKLIVLDVGLKHCGPCVKVYPTVLKLSRQMSDSVVFARMNGDENDSCMRFLRDMNVVEVPTFLFIRDGKINGRYVGSGKGELIGEILRYQGVRVTY 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele28g0054 298 SUPERFAMILY Thioredoxin-like 67 168 IPR036249 -
Lele28g0054 298 PANTHER THIOREDOXIN-LIKE PROTEIN CDSP32, CHLOROPLASTIC 1 298 IPR044192 GO:0016671
Lele28g0054 298 Pfam Thioredoxin 189 283 IPR013766 -
Lele28g0054 298 Gene3D Glutaredoxin 59 174 - -
Lele28g0054 298 SUPERFAMILY Thioredoxin-like 176 285 IPR036249 -
Lele28g0054 298 ProSiteProfiles Thioredoxin domain profile. 159 294 IPR013766 -
Lele28g0054 298 Gene3D Glutaredoxin 175 292 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele28g0054 Lele-ChrLele28 309250 310146 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g0046 25 280538 281434 Lele28g0054 28 309250 310146 hybridization
Lele26g0055 26 309753 310649 Lele28g0054 28 309250 310146 hybridization