Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele28g0048 ATGCCCTCATACGCTCGCCACGCGCGCCAGATTGTGAGTTCACCTACCTTCTTTGTGATTCCCCCAACTGCTCGGCGTCCTCAATATCTCCCTATATTAACCTCCTGCAGCTTCCATTCTTGGACACCCCGGAAACGCTTGCCCAGTCACCCTTCCATATTATTCAAATCTCATCTTCCTCTCTCTTCCTCTGCTCTCACTTCTTGGTTGTCAGGCCCGAGAATGGGTTCCCTCCGTGCCCTAGACGATCCTCTGCATTATCCTATTGCTCGTAGAGACGAGTCCGTCGTCGACGACTTCCATGGCGTTAAGATTGCCGATCCTTATAGATGGCTTGAGGATCCTGATGCGGAAGAAGTCAAAGAGTTTGTACAGAAGCAGGTTAAATTGACGGATTCCGTGCTTCAGCTATGCGATACCAGGGAGAAGCTTCGTGAAAATATCACAAAACTCTTTGACCATCCTCGCTATAATCCTCCCTTTAGGCGAGCAAATAAGTACTTCTATTTTCATAATACCGGTCTTCAGCCACAAGACGTCCTTTATATGCAGGATACTTTGGAGGGAGAACCAGTGGTTTTGCTTGATCCCAATGTTCTCAGTGAAGATGGAACTGTCTCGTTGAGCACACTTTCGGTGAGCGAGGATGCAAAATATTTGGCTTATGGCCTAAGTTCAAGTGGTAGTGATTGGGTGACAATAAAGGTGCTGCGTATTGAGGACAAGAATGCTGAGCCTGATATTTTATCATGGGTCAAGTTTTCTTCTATAAGCTGGACACATGATAGCGAAGGTTTCTTTTACAGTCGCTACCCAGCTCCCAAAGATGGAGAAGTGGGGGATGCTGGGACTGAGACAAATTCTAATCTTTATCATGAGCTCTATTATCATTTTTTGGGTACTGATCAATCAGAAGATATTCTTTGCTGGAGAGATCCTGAAAACCCTAAATATATGTTCGGAGCAAGTGTTACTGATGATGGAAAGTATGTCCTTCTTTATATTGAAGAAGGGTGTGATCCAGTTAACAAACTTTACTACTGTGACATGACTGCTCTTCCCAATGGGCTGGCGAGTCTTAGGAATGATAATGCCCTACTCCCGTTTGTCAAGCTTATTGATAATTTTGATGCACAGTATCAAGCCATTGCAAATGATGACAGTGTATTTACTTTTTTGACAAATAAAGATGCTTCAAAATATAAACTAGTTCAAGTTGATTTGAAAGAACCGACCGTATGGACTGATGTTCTCCCAGAATCTGAAAAAGATGTACTTGAGTCAGCATGCGCTGTAAATGGTAACCAAATGATTGTGAGCTACTTGAGTGATGTGAAGTATGTTCTGCAAGTGAGAGACTTGGAAACAGGCTCCTTGCACCATCAATTACCAATTGACATTGGCACAGTTTATGGAATTTCTGCACGGCGAGAAGATAGTGTGGTTTTCATAGGCTTCACAAGCTTTTTAACTCCTGGTATCATATATCAGTGCGATTTGGAAAATGAGGTTCCTCATATGAAGATCTTCCGTGAAATTACTGTCCCTGGGTTTGATCGCTTTGAGTTTCATGCCAACCAGGTTTTTGTACCCAGCAAGGATGGTACCAAGATCCCAGTTTTCATTGTTGCCAGAAAAAATATTGTTTTGGATGGCTCGCACCCTTGTTTATTGTATGGATATGGCGGTTTTAACATCAGTCTTACTCCATCTTTTAGTGTCAGTCGTATTGTGCTCTCAAGACATCTAGGTGCTGTTTTCTGCGTAGCAAATATACGTGGTGGTGGAGAGTATGGGGAGGAATGGCATAAAGCAGGCTCCCTTGCTAAAAAGCAGAATTGTTTCGATGACTTCATTTCTGCAGCTGAATACCTTGTATCTGCTGGTTATACCCAACCCAATAAGTTGTGCATTGAAGGTGGAAGCAATGGTGGACTTCTGGTTGGGGCTTGCATAAATCAGAGACCTGATCTTTTTGGCTGCGCACTGGCACATGTGGGTGTTATGGATATGCTGCGATTTCACAAGTTCACCATAGGTCATGCTTGGACCTCAGATTATGGTTGCTCAGACAAGGAGGAAGAGTTTCACTGGCTTATCAAGTACTCGCCATTGCATAATGTGCGGAGACCATGGGAAGAAAATCCTGATAAGTCAATTCAGTACCCATCAACCATGCTGTTAACAGCTGATCATGATGATCGTGTTGTACCATTGCACTCTTTGAAGCTACTGGCGACCACGCAGTATGTTCTGTGTACGAGCCTAGAAAAAAGTCCCCAGACAAACCCTATAATAGGTCGCATTGAATGTAAGGCTGGACATGGGGCAGGCCGACCGACGCAAAAAATGATTGATGAGGCTGCTGACCGCTACGCTTTCATGGCAAAAATGTTAGACGTGCATTGGACCGACTAG 2418 0.4396 MPSYARHARQIVSSPTFFVIPPTARRPQYLPILTSCSFHSWTPRKRLPSHPSILFKSHLPLSSSALTSWLSGPRMGSLRALDDPLHYPIARRDESVVDDFHGVKIADPYRWLEDPDAEEVKEFVQKQVKLTDSVLQLCDTREKLRENITKLFDHPRYNPPFRRANKYFYFHNTGLQPQDVLYMQDTLEGEPVVLLDPNVLSEDGTVSLSTLSVSEDAKYLAYGLSSSGSDWVTIKVLRIEDKNAEPDILSWVKFSSISWTHDSEGFFYSRYPAPKDGEVGDAGTETNSNLYHELYYHFLGTDQSEDILCWRDPENPKYMFGASVTDDGKYVLLYIEEGCDPVNKLYYCDMTALPNGLASLRNDNALLPFVKLIDNFDAQYQAIANDDSVFTFLTNKDASKYKLVQVDLKEPTVWTDVLPESEKDVLESACAVNGNQMIVSYLSDVKYVLQVRDLETGSLHHQLPIDIGTVYGISARREDSVVFIGFTSFLTPGIIYQCDLENEVPHMKIFREITVPGFDRFEFHANQVFVPSKDGTKIPVFIVARKNIVLDGSHPCLLYGYGGFNISLTPSFSVSRIVLSRHLGAVFCVANIRGGGEYGEEWHKAGSLAKKQNCFDDFISAAEYLVSAGYTQPNKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGVMDMLRFHKFTIGHAWTSDYGCSDKEEEFHWLIKYSPLHNVRRPWEENPDKSIQYPSTMLLTADHDDRVVPLHSLKLLATTQYVLCTSLEKSPQTNPIIGRIECKAGHGAGRPTQKMIDEAADRYAFMAKMLDVHWTD 805
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele28g0048 805 Pfam Prolyl oligopeptidase family 570 800 IPR001375 GO:0006508|GO:0008236
Lele28g0048 805 FunFam Prolyl endopeptidase 155 514 - -
Lele28g0048 805 PRINTS Prolyl oligopeptidase serine protease (S9A) signature 610 629 IPR002470 GO:0004252|GO:0006508
Lele28g0048 805 PRINTS Prolyl oligopeptidase serine protease (S9A) signature 582 606 IPR002470 GO:0004252|GO:0006508
Lele28g0048 805 PRINTS Prolyl oligopeptidase serine protease (S9A) signature 722 744 IPR002470 GO:0004252|GO:0006508
Lele28g0048 805 PRINTS Prolyl oligopeptidase serine protease (S9A) signature 555 573 IPR002470 GO:0004252|GO:0006508
Lele28g0048 805 PRINTS Prolyl oligopeptidase serine protease (S9A) signature 640 660 IPR002470 GO:0004252|GO:0006508
Lele28g0048 805 PANTHER PROLYL ENDOPEPTIDASE 83 804 - -
Lele28g0048 805 SUPERFAMILY Peptidase/esterase 'gauge' domain 84 503 - -
Lele28g0048 805 FunFam Prolyl endopeptidase 477 795 - -
Lele28g0048 805 Gene3D - 155 514 - -
Lele28g0048 805 Gene3D alpha/beta hydrolase 96 795 IPR029058 -
Lele28g0048 805 SUPERFAMILY alpha/beta-Hydrolases 527 748 IPR029058 -
Lele28g0048 805 ProSitePatterns Prolyl endopeptidase family serine active site. 617 647 IPR002471 GO:0004252|GO:0006508
Lele28g0048 805 Pfam Prolyl oligopeptidase, N-terminal beta-propeller domain 88 503 IPR023302 GO:0004252
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele28g0048 Lele-ChrLele28 264267 268641 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele28g0048 547 687 Carbohydrate Esterase AT5G36210 29.371 6.73e-06 47.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g0039 25 231886 234891 Lele28g0048 28 264267 268641 hybridization
Lele26g0045 26 265559 269933 Lele28g0048 28 264267 268641 hybridization