Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele28g0047 ATGTTGGACGAGAGCGAGGCCGCGAGTAGCATGGAAGGACCTCAGTTGAAGCATGTTACGCCTACCGCCGCTCAGCACCTGCTCTCTGATGCCCCCGCCGTTGCTCCCTCCGAGTTGGACGATACTGTCCAGAGTTTGCCTTCGAACGCTGTCAAGGACTTGTTGTCCCAAGAGATATGTGCTCGCTGCATCCTTCGGCTTTTTGGGGTCCAAGGGCGCGTCTATTCATGCTCCTTGCTTTCATCATCAACTATTAGTTGTATTATTGGAGGATCAACTGATTTGGACAGAGATACGATGGATAGTAGTTTTAGAAAATGTGAAAACTCAAGTAGTTCGAAGGAACCCAAATGTGATGCTAAAATTTGCAGCCTTTGCTTAGGGATGCTGCAGTTCAGATTTTCCTGTGACACAGGGACTCTATTGAAACAGAATACTCCTGATGCTATGGCTGTCTTAATTGCTGACATGGTTAGGGATGCTGGCCATCAGATTGACAGCTTTTCACTTGAAGTTTCAGTCCCACCTGTTATCGTTGAAAATGAGAATGCAATTCAGTCATACATGAGAACGAAATATGGAGCTGAGCCTTGGTTCCAAGAAAAGTTGCATTTTGGATGTCTGTCTACAAAGGACGCATTAAAGTTTTCAATAGTTTATCCTCTTGAAAATCTTCTTGGCAGTAAATCAAGTATGAACTCCTTCCGTATCCGTTTGACATATGGTCACCCTAACTCGTCAAAAGAGGCTAGAAAGTGTTCAGATGGTGATAAGAGTTGCAAGAGAATAAAAACAGGTGCGGACAATGGAGTGGGTGTTGCCTATGATTCCATGGTTTCTCACACTGAATACTCAGATTCTTTCAAATCTGAATCCAATCTAGTTGGAGAAAAGCCTTTCAACAGTTTGCCAGAAAATGAGTCCTCTAAGTCCTGTGGAATATTTCTAGAAAAGGTAATCGAACCTTGCCATTTTACAGTCTATTGCTACAGGGCACCTATCTATTTTGGTGGAAGATACCTGAAGTATTCACGGAATGTGAGTCAAACACGCTGGATCATTGATGATGAAAGAATGGGGGAAGCATCTGTTGAGGAAATAATTGGGGGAAACATCCTTCAAAAGTGCCATGGTGATAGCTACAAGTTTCATGCTGCTGGCAGAGAAGATATTGATGTCCGAATGTTGGGTCCAGGCAGGCCGTTTCTTGTTGAGGTGCAAAATGCGCGACTTGTCCCATCTGATCTTTTTGTAAAGGATATAGAGAAATTGATAAATTGCTTGGAGAATAAATTGGTTAGCGTGAAAAATCTGAAGTTGGTTGGCAGCCATGGTTGGAATCTTATGCGTGAAGGAGAGGCAGAGAAACAGAAGCAATATGCAGCTTTAGTGTGGATTTCTCGTCCTCTAACCGATGAAGATTTTCAATCTGTGTCTTCACTCAAGGATTTGAAAATATTGCAGAGGACACCAATAAGAGTGTTACATCGTCGGAGTCCTTTAGAGCGTGAAAAGATTATTCACTGGATGAAAATAGAAACTGTTGCTGGCAATTCACAGTACTTTCTTTTGCATTTGTGCACACAGGCTGGGACTTACATCAAGGAATTTGTTCATGGAGATCTTGGACGCACCCATCCTAGTATTGGATCAATTTTGGGTTGTAGAGCTGAAATTTTACAGCTTGATGTCACAAATGTCAAAATGGACAGTTTCCTTCCTTAG 1725 0.4261 MLDESEAASSMEGPQLKHVTPTAAQHLLSDAPAVAPSELDDTVQSLPSNAVKDLLSQEICARCILRLFGVQGRVYSCSLLSSSTISCIIGGSTDLDRDTMDSSFRKCENSSSSKEPKCDAKICSLCLGMLQFRFSCDTGTLLKQNTPDAMAVLIADMVRDAGHQIDSFSLEVSVPPVIVENENAIQSYMRTKYGAEPWFQEKLHFGCLSTKDALKFSIVYPLENLLGSKSSMNSFRIRLTYGHPNSSKEARKCSDGDKSCKRIKTGADNGVGVAYDSMVSHTEYSDSFKSESNLVGEKPFNSLPENESSKSCGIFLEKVIEPCHFTVYCYRAPIYFGGRYLKYSRNVSQTRWIIDDERMGEASVEEIIGGNILQKCHGDSYKFHAAGREDIDVRMLGPGRPFLVEVQNARLVPSDLFVKDIEKLINCLENKLVSVKNLKLVGSHGWNLMREGEAEKQKQYAALVWISRPLTDEDFQSVSSLKDLKILQRTPIRVLHRRSPLEREKIIHWMKIETVAGNSQYFLLHLCTQAGTYIKEFVHGDLGRTHPSIGSILGCRAEILQLDVTNVKMDSFLP 574
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele28g0047 574 SUPERFAMILY Pseudouridine synthase 454 568 IPR020103 GO:0001522|GO:0003723|GO:0009451|GO:0009982
Lele28g0047 574 FunFam tRNA pseudouridine synthase Pus10 458 568 - -
Lele28g0047 574 PANTHER UNCHARACTERIZED 41 570 IPR039894 -
Lele28g0047 574 Coils Coil 418 438 - -
Lele28g0047 574 FunFam tRNA pseudouridine synthase Pus10 333 457 - -
Lele28g0047 574 Gene3D - 458 568 - -
Lele28g0047 574 Gene3D - 333 457 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele28g0047 Lele-ChrLele28 254949 263215 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g0038 25 223891 228991 Lele28g0047 28 254949 263215 hybridization
Lele26g0044 26 259462 264589 Lele28g0047 28 254949 263215 hybridization