Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele28g0039 ATGGTAGTAATGATGACCGGTGCGGATGCGATCAAGGCGAAGTACGACTTGAGCTCGCTACATTCGGTTCTGTCGGGTGGGGCTCCATTGAGCAAGGAGGGGATCGAGGGCTTTGTGGACAAGTTCCCGAACGTCACAATTCTCCAGGGTTACGGGTTGACCAAATCCGCGGGAGTTGGGGCATCCACGGACTCACTAGAGGAGAATCGGAGGTACGACACGGCTGGGCTGTTGTCACCGGCCACCGAGGCCAAAGCCGTCGACCCCGAAACTGGAGAAGCTTTGCCGCCAAACCGGACCGGGGAGCTCTGGCTCAGAGGTTCCACTATCATGAAAGGTTATTTGAGTAACGAGGAAGCGACCAGCTCGACCCTTGATTCAGAGGGACGGTTGAGAACTGGAGATATTTGCTACGTTGATGGCGGTGGATATATTTTCATGGTCGATCGGTTGAAAGAGCTTATTAAATACAAGGGATATCAGGTGCCACCAGCAGAACTAGAGGCCTTGTTGCTTACTCATCCTGCAATTTCAGATGCTGCTGTCATACCGTAA 555 0.5297 MVVMMTGADAIKAKYDLSSLHSVLSGGAPLSKEGIEGFVDKFPNVTILQGYGLTKSAGVGASTDSLEENRRYDTAGLLSPATEAKAVDPETGEALPPNRTGELWLRGSTIMKGYLSNEEATSSTLDSEGRLRTGDICYVDGGGYIFMVDRLKELIKYKGYQVPPAELEALLLTHPAISDAAVIP 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele28g0039 184 Pfam AMP-binding enzyme 7 157 IPR000873 -
Lele28g0039 184 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 2 184 - -
Lele28g0039 184 Gene3D - 153 184 IPR045851 -
Lele28g0039 184 Gene3D - 1 152 IPR042099 -
Lele28g0039 184 SUPERFAMILY Acetyl-CoA synthetase-like 5 184 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele28g0039 Lele-ChrLele28 204994 205857 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele28g0039 1 184 Monolignol Biosynthesis Gene Families AT1G20480 63.043 1.37e-81 250