Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele28g0029 ATGATTGAAAAAAAGGAGGAGTTTCTCATTGTGGCGCCATTTGAGTGCGCATGGCGAAGGGATTTGAAATTCCGAGAAGCCGGTCGGGGTTGCGTGGTTTTCGAAGCTTTTGCGCGTAATGATATCACATTGGTTTTTCGGGAGAATGGGGGGAGCCGGCATTACCATTATAAAAGGGATAGTAGCCCCCACTATACCGTAATTTTGGGGAGCCATAGGAATAGAAGGCTGAGAATTGAGGTTGATGGAAAAACTGTCGTTGATGTGGCTGGTGCTGGACTTTGTTGCTCTTCATCATTCCAGAGTTACTGGATCAGCATCTACGATGGGTTGATTAGCATCGGCAAAGGAAAGTATCCTTTCGAGAATATTGTCTTCCAGTGGCTGGATTCTAATCCTAACTATAATGTTCAGTATATTGGGCTCTGCAGCTGGGATAAACACGTTGGATATAGAAATGTTAATGTGTTGTCGTTAACACACAATCATATATTTCAGTGGAAGCACGTGAGTTTTGGTGAATATGAAGTTGAGGAGGAGGGTGACGAGGAGTTGGGAGATAACCCGATGGATTATAACAACTGGGGCCTGAAAAATTTTCTGGAGAGCTGGGAATTGTCTGACGTTCTATTCTTTGTTGAGGAAAGACCTGTACCTGCTCATAAGGCTATTTTATCAGCATGTGGGGAATTTCCTATAGCCTCATCATTCTCTGTTATTTCGCTGCCCACAGTTACTTACCTGGTTTTTCACGCACTGCTGCAGTACATTTACGCTGGCTGGACTGAGATTCCTTTGGAACAACTGGATTCCTTGAGGGCTCTAAGTTTACAGTTTGAAGTGACTCCGTTGATTAAACAATGTGAAGAGACTATGGAGCGGTTTAAGCTAAACCAAAAGTTTGTCTCAGGGAAGAATGTGGAGTTATCATTACCAAGTACTAGGCCTCATTGCTGTTCAACTTTGCCCTCACTTCCTGTCAGTAGTCAGAGACTGGAACAATTGCAATTAACTGGCCAGTACAGTGATGTAAACGTATATATTGAGGGTTATGGGCTTGTTGCCCAAGCGCATAAAATTGTTCTCAGTTTATGGAGCATCCCATTTGCTAAGATGTTCACAAACGGAATGAGTGAAAGCATGTCTTCAGAGATTACTTTAAGGGATGTGCCACCAGAAGCTTTCAAAGCTATGCTTGACTTCTTATACAGTGGGAAACTAAATGATGAAGTTAATATAGATTCTGGTTCTTTGTTGCTGGAGCTGCTTTTGTTGGCTGACCAATTTGGAGTGACTCTTCTTCACCAGGAGTGCTGTAAAATGCTTCTAGAATGCCTTTCAGAGGACTCATTATGTCCACTCCTTCAAGTGATTTCTTCGATCCCATCATGTAGACATATTAAAGAAACATGTCAGAGGAAATTCTCCATGAACTTTGACTATTGTACTAGTGCGAGCACCTACTTTGTCTTGTTAGATGATACAACTTTCAGCAATATAATTCAGCATCCAGATTTGACTGTTACATCTGAAGAGAAAGTTCTCAACGCAATCCTAATGTTTGGCATGAAAACTCAAGAACTAGTCTCGTGGGAAGTGGTGGATGAATTGATGATAAATTCAAAACCTGAACTTCTTTTTGGTGAGAGGCTTCAGTTAGTTCATGACTTGTTGCCATTTGTGAGATTTCCGCTACTTCCATATTCCTTGCTTAAAAAGTTGCAGAGTAGCAACATTAGCAGACACGTTCTTGTGTTTCAAAATCTTGTTAATGAGGCTCTTAATTTTGTTGAAAGTGGACTGGCAAGCCCCGAAAATAAAGAGAATGTTAGATTCCTTCACAGACGATCTAGTTACAAGGAGCTCCAGTATATATGTGATGGGGACAGCAATGGAGTCTTGTATTTTGCAGGCACATCATATGGAGAACACCAGTGGGTTAATCCTGTTTTGGCAAAGACAATTACCATCACGGCTAGCAGTCCCAACTCAAGATACACTGACCCAAAGGTTTTGGCCTCAAGAACTTACCAGGGAACATCATTTGTGGGGCCTCGATTGGAAAATGGACATACTTGTGCCTGGTGGATGGTTGACCTTGGCAAAGATCATCAGCTCATGTGCAACTACTACACCTTGCGACAGGACGGTTCCAGGGCCTTCATGAGATTTTGGAATTTCCAGGGGTCTCTGGATGGGAAGAGCTGGACGAATTTGAGGGTACATGAAAACGACACGACAGTGAGCAAGCCTGGTCAATTTGCATCTTGGCCCATAACAGGGCCCAACGCTCTGCTTCCCTTTAAGTATTTCCGGGTTGTTCTAACGGCTCCCACCACTGATGCCACTAATCCCTGGAACTTGTGCATGTGTTACTTGGAACTATATGGCTATTTCCTTTAG 2403 0.4286 MIEKKEEFLIVAPFECAWRRDLKFREAGRGCVVFEAFARNDITLVFRENGGSRHYHYKRDSSPHYTVILGSHRNRRLRIEVDGKTVVDVAGAGLCCSSSFQSYWISIYDGLISIGKGKYPFENIVFQWLDSNPNYNVQYIGLCSWDKHVGYRNVNVLSLTHNHIFQWKHVSFGEYEVEEEGDEELGDNPMDYNNWGLKNFLESWELSDVLFFVEERPVPAHKAILSACGEFPIASSFSVISLPTVTYLVFHALLQYIYAGWTEIPLEQLDSLRALSLQFEVTPLIKQCEETMERFKLNQKFVSGKNVELSLPSTRPHCCSTLPSLPVSSQRLEQLQLTGQYSDVNVYIEGYGLVAQAHKIVLSLWSIPFAKMFTNGMSESMSSEITLRDVPPEAFKAMLDFLYSGKLNDEVNIDSGSLLLELLLLADQFGVTLLHQECCKMLLECLSEDSLCPLLQVISSIPSCRHIKETCQRKFSMNFDYCTSASTYFVLLDDTTFSNIIQHPDLTVTSEEKVLNAILMFGMKTQELVSWEVVDELMINSKPELLFGERLQLVHDLLPFVRFPLLPYSLLKKLQSSNISRHVLVFQNLVNEALNFVESGLASPENKENVRFLHRRSSYKELQYICDGDSNGVLYFAGTSYGEHQWVNPVLAKTITITASSPNSRYTDPKVLASRTYQGTSFVGPRLENGHTCAWWMVDLGKDHQLMCNYYTLRQDGSRAFMRFWNFQGSLDGKSWTNLRVHENDTTVSKPGQFASWPITGPNALLPFKYFRVVLTAPTTDATNPWNLCMCYLELYGYFL 800
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele28g0029 800 SMART BACK_2 452 575 IPR011705 -
Lele28g0029 800 Gene3D Potassium Channel Kv1.1; Chain A 195 308 IPR011333 -
Lele28g0029 800 PANTHER OS05G0345500 PROTEIN 2 800 - -
Lele28g0029 800 SUPERFAMILY POZ domain 329 443 IPR011333 -
Lele28g0029 800 CDD BTB_POZ_ZBTB_KLHL-like 341 412 - -
Lele28g0029 800 Pfam BTB And C-terminal Kelch 458 525 IPR011705 -
Lele28g0029 800 Gene3D - 650 798 - -
Lele28g0029 800 Gene3D - 477 597 - -
Lele28g0029 800 ProSiteProfiles BTB domain profile. 342 411 IPR000210 GO:0005515
Lele28g0029 800 ProSiteProfiles BTB domain profile. 207 266 IPR000210 GO:0005515
Lele28g0029 800 SUPERFAMILY Galactose-binding domain-like 644 799 IPR008979 -
Lele28g0029 800 Pfam Farnesoic acid 0-methyl transferase 54 149 IPR022041 -
Lele28g0029 800 SUPERFAMILY POZ domain 196 293 IPR011333 -
Lele28g0029 800 SMART BTB_4 342 446 IPR000210 GO:0005515
Lele28g0029 800 SMART BTB_4 207 296 IPR000210 GO:0005515
Lele28g0029 800 Pfam F5/8 type C domain 656 790 IPR000421 -
Lele28g0029 800 Pfam BTB/POZ domain 333 444 IPR000210 GO:0005515
Lele28g0029 800 Pfam BTB/POZ domain 197 293 IPR000210 GO:0005515
Lele28g0029 800 Gene3D Potassium Channel Kv1.1; Chain A 323 476 IPR011333 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele28g0029 Lele-ChrLele28 151255 157164 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g0016 25 111911 117330 Lele28g0029 28 151255 157164 hybridization
Lele26g0024 26 147892 153306 Lele28g0029 28 151255 157164 hybridization