Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele28g0027 ATGGATCCCTACAAGGTACAGCGATATCAAGACTTGCATCGACCATCAAGCGCCTTCAATTCTCCTTTCTGGACTACCAATTCCGGTGCTCCAATTTGGAACAACAATTCATCTCTGACGCTTGGATCTAGAGGTCCAATTCTCCTAGAGGATTACCACTTGGTGGAGAAGCTTGCCAATTTTGATAGGGAGCGGATCCCAGAACGTGTTGTTCATGCTAGGGGAGCCAGTGCAAAGGGTTTTTTTGAAGTCACTCATCACATTTCTCACCTGACATGTGCAGACTTCCTGCAAGCCCCTGGAGTTCAGACACCTGTAATTGTCCGTTTCTCAACTGTTATCCATGAGCGTGGCAGCCCAGAAACTCTGAGGGATCCTCGAGGTTTTGCTGTGAAATTTTACACCAGAGAGGGTAACTTTGATCTAGTGGGAAACAACTTTCCTGTCTTCTTCATCCGTGATGGAATGAAGTTTCCCGATATGGTTCATTCTCTTAAACCCAATCCCAAGTCTCATATCCAGGAGAACTGGAGGATCCTTGACTTCTTCTCCCACCATCCAGAAAGTCTTCACATGTTTACCTTTTTATTTGATGATGTGGGCGTCCCACAAGATTACAGGCACATGGAAGGTTCTGGTGTTAACACATATACGTTGATCAACAAGGCTGGGAAAGCACATTATGTGAAATTTCACTGGAAACCTACCTGTGGTGTCAAGTGTCTATTGGAGGAGGAGGCCATTCGGGTTGGAGGATCCAACCACAGTCATGCCACTCAAGATCTTTATGATTCAATTGCAGCTGGAAACTATCCTGAGTGGAAACTCTACATCCAGACAATTGATCCTGACCATGAACACATATTTGACTTTGACCCACTTGATGTAACTAAGACTTGGCCAGAGGACATTTTGCCCCTACAGCCAGTTGGTCGCTTGGTCTTGAATAAGAACATTGATAACTTCTTTGCTGAGAATGAGCAACTTGCATTTTGCCCTGCTATAGTAGTACCTGGCATATACTATTCAGATGATAAGTTGCTCCAAACTCGCGTCTTCTCCTATGCTGATACTCAGCGACACAGACTTGGGCCAAACTATCTGCAACTTCCTGCAAATGCTCCCAGGGCTGCTCATCACAACAATCACCATGAGGGTTTCATGAATTTCATGCACAGGGATGAGGAGGTCAATTACTTCCCATCAAGGTATGACCCTGTTCGTCATGCAGAAGTGTTCCCCATTCCTCCTCCTATTTTCACAGGAAAGCGTGAAAAGTGCATAATTGAGAAGGAGAACAACTTCAAGCAGCCAGGGGAAAGATACCGATCCTGGGCACCTGACAGGCAAGATAGATTTGTTAGCCGATGGGTTGAAGCTTTATCTGACCCACGCGTGACCCATGAGATCCGCAGCATCTGGATATCATACTGGTCTCAGGCTGACGGCTCTCTTGGTCAAAAGATAGCATCTCATTTGAATTTGAAGCCGAGCATCTAA 1500 0.4567 MDPYKVQRYQDLHRPSSAFNSPFWTTNSGAPIWNNNSSLTLGSRGPILLEDYHLVEKLANFDRERIPERVVHARGASAKGFFEVTHHISHLTCADFLQAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFPVFFIRDGMKFPDMVHSLKPNPKSHIQENWRILDFFSHHPESLHMFTFLFDDVGVPQDYRHMEGSGVNTYTLINKAGKAHYVKFHWKPTCGVKCLLEEEAIRVGGSNHSHATQDLYDSIAAGNYPEWKLYIQTIDPDHEHIFDFDPLDVTKTWPEDILPLQPVGRLVLNKNIDNFFAENEQLAFCPAIVVPGIYYSDDKLLQTRVFSYADTQRHRLGPNYLQLPANAPRAAHHNNHHEGFMNFMHRDEEVNYFPSRYDPVRHAEVFPIPPPIFTGKREKCIIEKENNFKQPGERYRSWAPDRQDRFVSRWVEALSDPRVTHEIRSIWISYWSQADGSLGQKIASHLNLKPSI 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele28g0027 499 ProSitePatterns Catalase proximal active site signature. 61 77 IPR024708 GO:0004096
Lele28g0027 499 Pfam Catalase-related immune-responsive 430 493 IPR010582 -
Lele28g0027 499 Pfam Catalase 25 405 IPR011614 GO:0004096|GO:0020037
Lele28g0027 499 SUPERFAMILY Heme-dependent catalase-like 20 496 IPR020835 GO:0020037
Lele28g0027 499 ProSiteProfiles catalase family profile. 21 499 IPR018028 GO:0004096|GO:0006979|GO:0020037
Lele28g0027 499 FunFam Catalase 21 499 - -
Lele28g0027 499 ProSitePatterns Catalase proximal heme-ligand signature. 351 359 IPR002226 GO:0020037
Lele28g0027 499 PANTHER CATALASE 13 494 IPR018028 GO:0004096|GO:0006979|GO:0020037
Lele28g0027 499 CDD catalase_clade_1 23 491 - -
Lele28g0027 499 Gene3D Catalase core domain 15 498 - -
Lele28g0027 499 SMART Catalase_2 25 408 IPR011614 GO:0004096|GO:0020037
Lele28g0027 499 PIRSF Catalase_clade1-3 14 498 IPR024711 GO:0004096|GO:0006979|GO:0020037
Lele28g0027 499 PRINTS Catalase signature 338 364 IPR018028 GO:0004096|GO:0006979|GO:0020037
Lele28g0027 499 PRINTS Catalase signature 141 159 IPR018028 GO:0004096|GO:0006979|GO:0020037
Lele28g0027 499 PRINTS Catalase signature 101 119 IPR018028 GO:0004096|GO:0006979|GO:0020037
Lele28g0027 499 PRINTS Catalase signature 38 61 IPR018028 GO:0004096|GO:0006979|GO:0020037
Lele28g0027 499 PRINTS Catalase signature 122 139 IPR018028 GO:0004096|GO:0006979|GO:0020037
Lele28g0027 499 PRINTS Catalase signature 306 333 IPR018028 GO:0004096|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele28g0027 Lele-ChrLele28 135007 138555 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele26g0022 26 134914 138415 Lele28g0027 28 135007 138555 hybridization