Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele28g0025 ATGGACATGGAACCAATTCTGTTCAAAGGGCCGACCAATCATGGAAGAGGTGATTCCGTGTTGGTGACGCTTCCGCTGACTTTGAGATAGTTAGATTGGGAGGGGCCAAGTCCCACGGGGGAGATCGTGACGCCAAATTTAAAAATGTTCTGCTTGGATGATTTGAAGAGTGCCACCAGAAACTTCAGACCCGACACGGTGCTGGGGGAGGGCGGCTTTGGCAGAGTATTCAAGGGATGGATTGACGAAAACACCCTCAAGCCCTCCAAAATTGGCGTCGGAATCCCCGTTGCCGTCAAGAAATCTAATCCCGATAGTCTCCAGGGCTTGGAAGAATGGCAGAGCGAGGTGAAATTCCTGGGGAAGTTCTCCCATCCAAACCTGGTGAAGCTGATTGGCTACTGCTGGGATGAGAATCAGTTTATGCTTGTATACGAGTACATGCGAAAGGGCAGCTTGGAAAACCACCTGTTTGGAAGGGGACCCGACCCGCTTGCATGGGACATAAGGCTTAAGATCGCCATAGGAGCAGCTCGAGGCCTGGCCTTCCTCCATGCCTCCGAGAAGTCCGTCATCTATCGCGACTTCAAGTCCTCCAACATTTTGCTGGATGAGGAGTTCAATGCGAAGCTTTCAGATTTCGGGCTGGCAAAGCTTGGCCCCGTCAACGGCAGATCCCACATAACCACTAGGGTCATGGGCACTTACGGTTATGCGGCCCCCGAGTACATAGCCACCGGTCATCTGTACGTGAAGAGCGATGTGTACGGCTTTGGGGTTGTGCTGCTGGAAATTCTGACCGGCTTAGTGGCTCTTGATCCCAACAGGCCCAGCAGTGAGCATAATTTGGTGGAATGGAAGAGACCCTATTTGAGCGATAAGAAGAAGCTACGAACCTTAATTGACCCCAAACTGGGCCACAAGTATTCCCCAAGAGCAGCCTTTAACATATGCCGCCTCATTCTCCAGTGCTTAGAATCCGACCCTAAAAATCGACCATCCATGCGAGATGTCCTGTCCACTCTAGAGAAAGCCTATCGCATCCCATATAATCCGAAGCCCAAGCCCAAGCCCAGTGCTGTTCAACCACCCTGA 1095 0.5178 MDMEPILFKGPTNHGRGDSVLVTLPLTLRXLDWEGPSPTGEIVTPNLKMFCLDDLKSATRNFRPDTVLGEGGFGRVFKGWIDENTLKPSKIGVGIPVAVKKSNPDSLQGLEEWQSEVKFLGKFSHPNLVKLIGYCWDENQFMLVYEYMRKGSLENHLFGRGPDPLAWDIRLKIAIGAARGLAFLHASEKSVIYRDFKSSNILLDEEFNAKLSDFGLAKLGPVNGRSHITTRVMGTYGYAAPEYIATGHLYVKSDVYGFGVVLLEILTGLVALDPNRPSSEHNLVEWKRPYLSDKKKLRTLIDPKLGHKYSPRAAFNICRLILQCLESDPKNRPSMRDVLSTLEKAYRIPYNPKPKPKPSAVQPP 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele28g0025 364 ProSitePatterns Serine/Threonine protein kinases active-site signature. 191 203 IPR008271 GO:0004672|GO:0006468
Lele28g0025 364 PANTHER OS01G0588500 PROTEIN-RELATED 41 344 - -
Lele28g0025 364 FunFam Serine/threonine-protein kinase BIK1 37 147 - -
Lele28g0025 364 SUPERFAMILY Protein kinase-like (PK-like) 42 343 IPR011009 -
Lele28g0025 364 CDD STKc_IRAK 68 344 - -
Lele28g0025 364 ProSitePatterns Protein kinases ATP-binding region signature. 68 101 IPR017441 GO:0005524
Lele28g0025 364 FunFam Serine/threonine-protein kinase PBS1 148 358 - -
Lele28g0025 364 ProSiteProfiles Protein kinase domain profile. 62 346 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele28g0025 364 Pfam Protein tyrosine and serine/threonine kinase 66 342 IPR001245 GO:0004672|GO:0006468
Lele28g0025 364 Gene3D Phosphorylase Kinase; domain 1 46 147 - -
Lele28g0025 364 Gene3D Transferase(Phosphotransferase) domain 1 148 351 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele28g0025 Lele-ChrLele28 110853 113954 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele28g0025 43 359 Glycoside Hydrolase AT3G07070 47.112 2.73e-95 288
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Lele28g0025 PK_Tyr_Ser-Thr 3.8e-46 CL0016