Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele28g0008 ATGGTTCCACTCATGCATTTCTCTCTGAAGTCTGAAACCTTTCTCTTGTTGCATCATCCTCTAGCAGCATATGCAGCTCTTAAGCCATCACCTAGGATTGTACAGTGGTTTTCTTCTCTGGGGAAGACATACTTGGATATTTGGACTGAAATGGAAAAACTAGAAAGTTTGAGGAAACACAGAATTTCATCCGTGAGAGCTGAAATGACACAGAAAAAGCACTTTGTCTTTTCTTTCTTCCTTTCCCCTTTTTTGCCAGAAAGAGGAGACAAGGGATTAGGTTCCCCTGATTTCCATGATGATCTCTCCTCTTCCAACCTTTTCACCTTCTATCTCCCACATGTTTTGAGGGTGTCTGATTCAAATGGAGCCATATCTAATGTGACGCTCCGTCAAGCTGCCACATCTGGTGGAACTGTGACTTATGAGGGACGGTATGAGATCCTATCACTATCTGGTTCTTTTCTTCTATCTGAACATAGTAGTCAGTGGAGTAGAACTGGTGCATTAAGTGTATCCTTGTCTGGACCAGATGGCCGTCTTTTAGGTGGGGGAGTTGCTGGACTTTTGACAGCTGCTTCACCTGTGCAGGTTGTTGTAGGGAGCTTCATTTCAGATGGTGGGAAGTCATCAAAGTCTGCAAACCAATTGGAAATATTATCTGCCCCACCAAAGTTGGCCGCAAGCAGTGGTCCAGCGGGGCCGAGCAGCTCCCCATCACAGGGCAGTCATAGTGAATCGTCAGGAGGACCTGGGAGCCCACTTTACCCAAGCACAGGAGAAGCCTGCAATAGCATGAAACTACAAAGCATTTCATGCATGCCGTGGAAATAA 834 0.458 MVPLMHFSLKSETFLLLHHPLAAYAALKPSPRIVQWFSSLGKTYLDIWTEMEKLESLRKHRISSVRAEMTQKKHFVFSFFLSPFLPERGDKGLGSPDFHDDLSSSNLFTFYLPHVLRVSDSNGAISNVTLRQAATSGGTVTYEGRYEILSLSGSFLLSEHSSQWSRTGALSVSLSGPDGRLLGGGVAGLLTAASPVQVVVGSFISDGGKSSKSANQLEILSAPPKLAASSGPAGPSSSPSQGSHSESSGGPGSPLYPSTGEACNSMKLQSISCMPWK 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele28g0008 277 ProSiteProfiles PPC domain profile profile. 84 225 IPR005175 -
Lele28g0008 277 MobiDBLite consensus disorder prediction 225 261 - -
Lele28g0008 277 Pfam Plants and Prokaryotes Conserved (PCC) domain 122 203 IPR005175 -
Lele28g0008 277 MobiDBLite consensus disorder prediction 231 261 - -
Lele28g0008 277 SUPERFAMILY AF0104/ALDC/Ptd012-like 118 205 - -
Lele28g0008 277 Gene3D - 113 222 - -
Lele28g0008 277 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 121 253 IPR039605 GO:0003680
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele28g0008 Lele-ChrLele28 41395 44156 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele28g0008 100 277 AT-hook Motif Nuclear Localized (AHL) Family AT2G33620 57.377 1.22e-47 160