Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele27g2073 ATGGCTCACGATTTTTTGTTAGAGATAGTCTCTACTAAACTGATGAGTGCTAAGAACCCTAAAAATGTGTATCACATCGGAGGCCTCCAAGTGGAATTTCCTTACAAGCCATACGGTTCTCAGTTTGCATTTATGGGCAGAGTCATCTCTACCCTTAACCGGGCTCAGAGAGAAGGCCACTGTCACGCATTGCTTGAGTCTCCAACCGGTACTGGCAAGTCCCTTTCGCTTCTCTGTTCCTCCCTCGCTTGGCAGCAGTACTACACAAATCTCTCTCCCCTAAAGCCCCTTCCAGAAGCAACGACAGACCCTCTTGTTTACGGTGGTGGATTTGTTCCATACGAGGTTTCCCCGACATCAGAAAATATGGAGCTGCCAGAGATTGAGGCTAACAAAACGCAGAAGAAAAAGGCTGCACCCACTATATATTATGCTTCGAGGACACACTCACAAATTTCTCAAGTAATTCGTGAATTGCGGAAAACATCTTATAGGGGGCCTATGGCTGTGCTGGCATCACGGAAACATTACTGTACCAATAAACATATACTAGCCAAAGACAATATTGACGAAGAATGTAAACTGCTTTTGAAAGATCAGGCAATAGGATGCCCAGAATTCAAAAATGCACATAAAGTCAGAAGTCACCCATCCCTACAAAGAGGAGGATGTAATGAGGTACATGATATAGAAGATCTTTTGAAAGTCGGACAAGCAGTGAAAGGTTGCTCCTATTATGCAGCTCGCTCTATGTCAGATGATGCGCAATTGGTATTTTGTCCTTATAGTTATATTATTAATCCAGTCATTCGGGGAGCAATGGATGTAGATATAAAAGGCGCCATTGTGATTCTGGATGAAGCCCACAATATAGAGGATATCACTCGTGATGCTGGTAGTGTGGATATTGAAGAGGATGTTTTGGATAAGCTGCAAATGGAGCTTCAACAACTTTGTCCTGTCAATGCTCTGATATACCAACCATTGTATGAAATGGTGCAGGGTCTTACAAGCTGGATAGAACGCAGGAAAAATAAACTAGAAAAGCGTGATTTTCAGCACTATGTATCTTGTTGGACTGGGTCAAATGCTTTAACAGAACTCCAAGAAGCAAATATTTCACTTCAGTGCTTCCCTATCTTGCTAGAATGCGCTACCAAGGCAATCAAAGTTGCTTCAGATTTGGAGTCGGATGTACCACATTTAAGTGGCATGTCAGTTATAACAATGGAAGGCTTATTCTCTTCGCTAACCTATTTCTTCTCAAGAAATGGTTCTCACATGCTGGATTACCAGCTTGCTCTGCAGCGAAGTGTTAAGAAAGAAGCTGGAAGATCTGTTGGAAATTGGACCCACACTTTGAGTTTATGGTGCCTGAATCCAGCAGTTGTGTTTAGTGACATTGCCAATCTTTCTTTATCAGTCATTTTGACTTCTGGGACATTGTCACCAATGAACTCATTTTCATCTGAGCTAGGAGTTCAGTTTGAAACTAGTCTGGATGCTCCGCATGTAATTAATGTTGACTCTCAGGTATGGCCTGCTATTATCTGTACCGGTCCGGATAATTATCCTTTGAATGCAAGTTATAAAACAGCAGATGGATATGCATTCCAGGATGCAGTTGGAAGATCTTTAGAGGAAATATTCAAAATTGTTCCCGGTGGTTGTCTTGTTTTCTTTCCAAGTTATAAATTAATGGAGAAATTATGCAATCGGTGGTCTGAAACAGGTCAATGGTCTTGTCTAAATGCGGAAAAGTCACTTTTTGTCGAACCTAGAGGAGGAAGCCAAGATGATTTTGAACTTACTTTAAAAGGATATTATGACTCAATTCATCTTCACTCTACACCTACATTGGGCAGGAAAAGAAGGGTTAAGAATGTTGGCTTTAGTCACTTACATGCAGTCAATTCTCCAAAAAATTCTAAGAAAGGAGGAGCTGCTTTACTTGGCGTTTGTCGAGGAAAGGTTTCTGAAGGCATTGATTTTTCTGATGATAATGCTCGAGTGGTTATTATAGTCGGCATTCCTTTTCCCAACATAAATGATATTCAAGTTGCACTAAAGAAGAAATACAACGACACATACAAATCATCCAAAAATCTTTTGAGTGGAAATGAATGGTATTGCCATCAAGCATTTCGAGCTTTGAATCAAGCAGCAGGTCGTTGTATACGGCATAGGCTTGATTATGGAGCAGTCATCTTATTGGATGAACGTTTTCAGGAAGAAAGAAATAGAGCATTCATTTCGAAGTGGTTAAGAAAAAGCTTAAGGATATATGACAATTTTGACTTGTCTTTGAAGGGACTGAAATCATTCTTTGAGAATGCCAAGGAGCAGTTTGGCACAAATATCACTCAAAATTTGGGATTAAACCAGGAATGTGTCCAAGCCAAGGATCAGCATGTGGGATTTATAAGACAGACAAATAAGAAACTGTTAAAGTCTGATAATGGTGGTGAGGGCAAAATAGAAATGATCAAGGATGAGATTCAGCCATCTGTGCAAAAGAATAGTGACTCATACAACTGTAAAGACTGTTTTGACCCAAAGGACTGCGAACAGGCAGTATCACGCTTCACTGGGGTATCATCTGCGACAGTTATACATGAAGAAGTCTCCCTTGTGAAGGGATCCCCTTGCATGGATGGCAACATTGTCCCTGCTAGCCCTGTTTATGGTTGTAAGGATGACCACTCTAGCTCCACCTTAATTGAGGCATCTTCCGAATTAAATGATCAGTCAGCCCTTCCATTTTCTTCAAGTATTGGAAGTAAAGTTTCTTCAACAGCTCAGTGTTTAATATCAGTTACTCCTGAAAAAAATGTAACTGCGAACAGCTATCATACTGTGGAAATAGAATCATCTTTAAATAGGAGTGTTAATTCTCACACCCAGAAAAGGAGAAAGTCCATGGACATACCTTTTATAAGCCTTATTGAGGAAGGAAATTACATCACCCCCTGTGCCAGCATCCCTTCAAGGCACACTGGAAGCTTGGTGAATCTCAAGGAGGCAACGAACGGAAATGAATCTGATTTTCACAAAAAATTGAAGCCAAATTCACTTAAATCACATCTTGTCAATCTCACTAGTTCATTTTTATTAACTGATCCTCTCATGGAGAAAAGGTTACAGATATTTTGCTCACTTTGCAAAAACCCTTTGGGTCGGCCTGAGAATAATTTATATATTTCGTGTTCTTTGACTTCATCATCAAAAGTTCACTTAAGATCTCTTTTGAAACAGAGACTGAAAGCTTACAATGATGATGATTTAAGAAGTGTACCAGTCATTATAACTTGCATTTCATATGTCGATCAACGCATCTGCAATAGAGTTAACGAAAGTGTTTCAGAGCAGGGTATTTGGTGCCCAGAAGATGGGTGTGTTTTCAGGTCTATGTTTTGCCCCTTCTGCCGTAAACCCAACAATTTGCTTGGAGTACATATCATGGCAACTGATGCATCAAATAGCTATTTACTTGACAAGATGTTGTTTTACTTCGATTTTTTGGAAGTTAAGAATCTCGAGGAATCAAGGAGTGAGGTTTCAAAGAAAGCGGATTTGCTGCCAAATAGAGGCTCTGGTGTGGATTCTTTTGACAAATTTGCTGAACTTCCAGAACATGAGAAGTCAAGAGTCTTGAAGACTAGAAAATCGAAGATTTACCCTCGACTGTTTGAGGAAGTAAGAAGTAACGTCGTCCTCTTTAAGGGGACTGCTTCTGCTGATGAAAAAGGCCAAAAAGATGGCATGTTTGGAGTGCGAGAAAAGAGCAGGAAAATGGGCGAGGTATCTGAAACGATGACGAAGAGGAAGAAGAAGGGGCGCCCATCTCTATTAGATCTTCAAAAACGCACTCTTAAAAAACAACAGCAACATCAACAACAGCAATTGCAGCTGCAGAACCCGAAATTAATCAATTCACATTCTGACCTAAACCGTCGTCCCACCCGCCGAAACTCCGTTCTTGGTTTAAGGCAGGCGACGGAGGGGATTGCTGACGATGACGATGACGATGACGATGAGCGTAAAGAGAAGAAGCATAAGCTCTTGGTTGGTTTGAATTCTCATCATCATTATTCGACATTATCGCCGCTCAGTTCGGATCCGTACGGCACTAACTGGAACGAGGACGGTCACGATCCCGAGGATCCCCGCAAGAGACGCAAGATCAATGTCACATATCACGGATCAGATGAAACGGATGAAAAGGTTCCTAAAGCGACGGACAGCAAACATGGTTCGCACGGGGAGTCCGGTCCCACTACACCTTTGCCAGACAAAAAGCTCTTGGTGTTTATACTTGATAGGCTTCAAAAAAAGGATACCCACGGAGTGTTCTCAGAACCTGTGGATCCAGAAGAGCTTCCTGATTATCATGATATCATTGAACACCCGATGGATTTTGCAACGGTGAGGAAGAACTTGGATGGCGGAGTTTATAACAATTTAGAACAATTTGAGAAAGATGTATTCTTAATATGCTCAAATGCAATGCAATATAATGCATCGGATACTATTTACCATCGGCAGGCCCGAGCAATGCAAGAGTTGGCTAGGAAGGACTTTGGTAATCTCCGGCAGGATAGCGATGATAGTGAACCACAGCCCAAAATTGTGAGGAGAGGCAGGCCGCCAGGCAAGAACTCAAGAAAGTCATTGGGAATGTCTCCCTCTGAGCTTGTTGCTCCTGATTCTTCCTCAGATGTAACACTTGCTTCGGGAGGAGATAATGCCAGTGGTCCAAACAGTTATAATCTGAGAAAAGCAATAGGTAAGTTCCAGCCTGCAGATTCATTAGTCAGGACTTCACACAGCACATTAAACAGTACAGGATATACTAATTGGTTGTCTGAATGGGAGAGTGAATTTCCAGCTTCTGTTTTGAAAGCTGTTTTAAGATATGGAAAAAAGCAATTCATGGTTGATGAGACCAGGCGTGACACTTACAAGCATCCAGTGGCTGCTGAGAATGAACCTCCAGTGCTGGCTACAATTGAAGAATTCAAGCAACTAATTGCAGTGGGTTTGAATGTGAAGCATAGCTATACGAGAAGCCTGGCCCATTTTGCTGCCGATCTTGGTCCAGCTGTTTGGAAGATTGCTGCAAGGAAAATCAGCAGTGTTTTACCAGTTGGACAAGAATTTGGTCCTGGATGGGTAGGAGAAGATGAGGTGTCACAGCGGGAACAGTTCACAATTTGTGATAAGGCTAGATCTTTACACGCTTTTGTACCAGACGATTGTTCAAGTAGATTTCCTCCCCCATCTGGCTCATTTGCTGTTGCAAATAAATCAGGCTTACAAAGTGGAGACGTGAAATTAATCAGAGGATTGAATTCCCAAAATGAGTTTAATTCAGTTAACAGTGTTGATTCTGGCGTTGAATATGTGGTTCCTTCAAGGATTCAGCAGGAATCTGCTGTTCACTCTGATGATTTATTTGATTCAAATGATCGGCTAGGTCCTAATTTTTCACCTCAAATGAGGATGGTAAAGCTTTCTGACTTAACTGGCCTGCATAGTTCGTGTGATGGTCCTCAAATGATTGACAAGGATATACCCGGCAACTTTGCTGCCTGCTTGACACCTTCAAATATGAGTTTACCTGTAAAGACCCAAATCTCAAACGAGTTTGGCCAATCAGATTCCAGTTATATATTGGCCCAGGAATCCGGGTCTGATTTTCAAAAAGGGTTTGCTGTTAAACCGTCCTGGCAAGAATTATCAATCCCTGTGAGACACAATTCGTTGTCAATTGCTGATGACTTCAATTGGAAGGTTGGAGCAACAAATGCACCTACTTCCAGTGTGGATACTGGTTCTCATCTGCAGCCAAATTTGGCACTCCAGCTTTGA 5871 0.4163 MAHDFLLEIVSTKLMSAKNPKNVYHIGGLQVEFPYKPYGSQFAFMGRVISTLNRAQREGHCHALLESPTGTGKSLSLLCSSLAWQQYYTNLSPLKPLPEATTDPLVYGGGFVPYEVSPTSENMELPEIEANKTQKKKAAPTIYYASRTHSQISQVIRELRKTSYRGPMAVLASRKHYCTNKHILAKDNIDEECKLLLKDQAIGCPEFKNAHKVRSHPSLQRGGCNEVHDIEDLLKVGQAVKGCSYYAARSMSDDAQLVFCPYSYIINPVIRGAMDVDIKGAIVILDEAHNIEDITRDAGSVDIEEDVLDKLQMELQQLCPVNALIYQPLYEMVQGLTSWIERRKNKLEKRDFQHYVSCWTGSNALTELQEANISLQCFPILLECATKAIKVASDLESDVPHLSGMSVITMEGLFSSLTYFFSRNGSHMLDYQLALQRSVKKEAGRSVGNWTHTLSLWCLNPAVVFSDIANLSLSVILTSGTLSPMNSFSSELGVQFETSLDAPHVINVDSQVWPAIICTGPDNYPLNASYKTADGYAFQDAVGRSLEEIFKIVPGGCLVFFPSYKLMEKLCNRWSETGQWSCLNAEKSLFVEPRGGSQDDFELTLKGYYDSIHLHSTPTLGRKRRVKNVGFSHLHAVNSPKNSKKGGAALLGVCRGKVSEGIDFSDDNARVVIIVGIPFPNINDIQVALKKKYNDTYKSSKNLLSGNEWYCHQAFRALNQAAGRCIRHRLDYGAVILLDERFQEERNRAFISKWLRKSLRIYDNFDLSLKGLKSFFENAKEQFGTNITQNLGLNQECVQAKDQHVGFIRQTNKKLLKSDNGGEGKIEMIKDEIQPSVQKNSDSYNCKDCFDPKDCEQAVSRFTGVSSATVIHEEVSLVKGSPCMDGNIVPASPVYGCKDDHSSSTLIEASSELNDQSALPFSSSIGSKVSSTAQCLISVTPEKNVTANSYHTVEIESSLNRSVNSHTQKRRKSMDIPFISLIEEGNYITPCASIPSRHTGSLVNLKEATNGNESDFHKKLKPNSLKSHLVNLTSSFLLTDPLMEKRLQIFCSLCKNPLGRPENNLYISCSLTSSSKVHLRSLLKQRLKAYNDDDLRSVPVIITCISYVDQRICNRVNESVSEQGIWCPEDGCVFRSMFCPFCRKPNNLLGVHIMATDASNSYLLDKMLFYFDFLEVKNLEESRSEVSKKADLLPNRGSGVDSFDKFAELPEHEKSRVLKTRKSKIYPRLFEEVRSNVVLFKGTASADEKGQKDGMFGVREKSRKMGEVSETMTKRKKKGRPSLLDLQKRTLKKQQQHQQQQLQLQNPKLINSHSDLNRRPTRRNSVLGLRQATEGIADDDDDDDDERKEKKHKLLVGLNSHHHYSTLSPLSSDPYGTNWNEDGHDPEDPRKRRKINVTYHGSDETDEKVPKATDSKHGSHGESGPTTPLPDKKLLVFILDRLQKKDTHGVFSEPVDPEELPDYHDIIEHPMDFATVRKNLDGGVYNNLEQFEKDVFLICSNAMQYNASDTIYHRQARAMQELARKDFGNLRQDSDDSEPQPKIVRRGRPPGKNSRKSLGMSPSELVAPDSSSDVTLASGGDNASGPNSYNLRKAIGKFQPADSLVRTSHSTLNSTGYTNWLSEWESEFPASVLKAVLRYGKKQFMVDETRRDTYKHPVAAENEPPVLATIEEFKQLIAVGLNVKHSYTRSLAHFAADLGPAVWKIAARKISSVLPVGQEFGPGWVGEDEVSQREQFTICDKARSLHAFVPDDCSSRFPPPSGSFAVANKSGLQSGDVKLIRGLNSQNEFNSVNSVDSGVEYVVPSRIQQESAVHSDDLFDSNDRLGPNFSPQMRMVKLSDLTGLHSSCDGPQMIDKDIPGNFAACLTPSNMSLPVKTQISNEFGQSDSSYILAQESGSDFQKGFAVKPSWQELSIPVRHNSLSIADDFNWKVGATNAPTSSVDTGSHLQPNLALQL 1956
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele27g2073 1956 SMART deadxpd 29 323 IPR006554 GO:0003678|GO:0016818
Lele27g2073 1956 SUPERFAMILY Bromodomain 1413 1535 IPR036427 GO:0005515
Lele27g2073 1956 SMART bromo_6 1424 1532 IPR001487 GO:0005515
Lele27g2073 1956 FunFam Fanconi anemia group J protein-like isoform E 127 340 - -
Lele27g2073 1956 MobiDBLite consensus disorder prediction 1529 1588 - -
Lele27g2073 1956 Gene3D - 1430 1545 IPR036427 GO:0005515
Lele27g2073 1956 MobiDBLite consensus disorder prediction 1363 1429 - -
Lele27g2073 1956 MobiDBLite consensus disorder prediction 1380 1418 - -
Lele27g2073 1956 FunFam Fanconi anemia group J protein homolog 523 770 - -
Lele27g2073 1956 CDD SF2_C_XPD 510 742 - -
Lele27g2073 1956 Gene3D - 523 768 IPR027417 -
Lele27g2073 1956 Pfam DEAD_2 144 307 IPR010614 GO:0003677|GO:0003678|GO:0005524
Lele27g2073 1956 Gene3D - 36 334 IPR027417 -
Lele27g2073 1956 ProSitePatterns Bromodomain signature. 1448 1505 IPR018359 -
Lele27g2073 1956 PANTHER DNA REPAIR DEAD HELICASE RAD3/XP-D SUBFAMILY MEMBER 26 778 IPR045028 -
Lele27g2073 1956 MobiDBLite consensus disorder prediction 1247 1292 - -
Lele27g2073 1956 MobiDBLite consensus disorder prediction 1556 1588 - -
Lele27g2073 1956 SMART Cxpdneu3 564 744 IPR006555 GO:0003676|GO:0004386|GO:0005524|GO:0006139|GO:0016818
Lele27g2073 1956 Pfam Bromodomain 1438 1517 IPR001487 GO:0005515
Lele27g2073 1956 ProSiteProfiles Bromodomain profile. 1443 1513 IPR001487 GO:0005515
Lele27g2073 1956 MobiDBLite consensus disorder prediction 1363 1378 - -
Lele27g2073 1956 MobiDBLite consensus disorder prediction 1293 1314 - -
Lele27g2073 1956 MobiDBLite consensus disorder prediction 1529 1545 - -
Lele27g2073 1956 Pfam Helicase C-terminal domain 546 757 IPR006555 GO:0003676|GO:0004386|GO:0005524|GO:0006139|GO:0016818
Lele27g2073 1956 MobiDBLite consensus disorder prediction 1247 1349 - -
Lele27g2073 1956 PRINTS Bromodomain signature 1476 1494 IPR001487 GO:0005515
Lele27g2073 1956 PRINTS Bromodomain signature 1460 1476 IPR001487 GO:0005515
Lele27g2073 1956 PRINTS Bromodomain signature 1446 1459 IPR001487 GO:0005515
Lele27g2073 1956 PRINTS Bromodomain signature 1494 1513 IPR001487 GO:0005515
Lele27g2073 1956 ProSitePatterns DEAH-box subfamily ATP-dependent helicases signature. 281 290 IPR002464 -
Lele27g2073 1956 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-2 domain profile. 27 359 IPR014013 GO:0005524
Lele27g2073 1956 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 57 738 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele27g2073 Lele-ChrLele27 24627074 24648093 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g0012 25 61266 73237 Lele27g2073 27 24627074 24648093 hybridization