Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele27g2068 ATGAATATCCAGATGATTGAAAAGAAGGAGGAGTTTCTCATTGTGGCGCCATTTGAGTGCGCATGGCGAAAGGATTTGAAATTCCGAGAAGCCGATCGGGGTTGCGTGGTTTTCGAAGCTTTTGAGCTCAATGATATCACATTGTTTTTTCGGGAGAATGTGGGGAGCCGGCATTACCATTATAAAAGGGATAGTAGCCCCCACTATACCGTCATTTTGGGCAGCCATAGGAATAGAAGGCTGAGAATTGAGGTTGATGGAAAAACTGTCGTTGATGTGGCTGGTGCTGGACTTTGTTGCTCTTCATCATTCCAGAGTTACTGGATCAGCATCTACGATGGGTTGATTAGCATCGGCAAAGGAAAGTATCCTTTCCAGAATATTGTCTTCCAGTGGCTGGATTCTAATCCTAACTATAATGTTCAGTATATTGGGCTCTGCAGCTGGGATAAACACGTTGGATATAGAAGTGTTAATGTGTTGTCGTTAACACAATCATATGTCCCAGTGGAAGCACTGGAAAGACCTGTACCTGCTCATAAGGCCATTTTATCAGCATGTGGGGATTTTCCTTTAGCCTCATCATTCTCTGTTATTTCGCTGCCCACAGTTACTCACCCAGTTTTCCACGCACTGCTGCAGTACATCTACGCTGGCTGGACTGAGATTCCTCTGGAACAACTGGGTTCCTTGAGGGCTCTAAGTTTACAGTTTGAAGTGACGCCATTGGTTAAACAATGTGAAGAGACTATGGAGCGGTTTAAGCTAAACCAAAAGTTTGTCTCAGGGAAGAATGTGGAGTTATCATTTCCAAGCACTAGGCCTCATTGCTGTTCAACTTTGCCCCCACTTACTGTCAGTAGTCAGAGACTGAAACAATTGCAATTAACTGGCCAGTACAGTGATGTAAACGGATATATTGAGGGTTATGGGCTTGTTGCCCAAGCGCATAAAATTGTTCTCAGTTTATGGAGCATCCCATTTGCTAAGATGTTCACAAACGGGATGAGTGAAAGTATGTCTTCAGAGATTACTTTAAGGGATGTGCCACCAGAAGCTTTCAAAGCTATGTTTGACTTCTTATACGGTGGGAAACTAAATGATGAAGTTAATATAGATTGTGGTTCTTTGTTGCTGGAGCTGCTTTTATTGGCTGACCAATTTGGAGTGACTCTTCTTCACCAGGAGTGCTGTAAAATGCTTCTAGAATGCCTTTCAGAGGTAGACTCATTATCTCCACTCCTTCAAGTGATTTCTTTGATCCCATCATGTAGACATATTAAAGAAACGTGTCAGTGGAAATTCTCCATGAACTTCGACTTTTGTACTAGTGCGAGCACCGACTTTGTCTTGTTAGATGATACAACTTTCAGCAATATAATTCAGCATCCAGATTTGACTGTTACATCTAAAGAGAAATTGCAGAGTAGCAACATTAGCAGACACGTTCTTGTGTTTCAAAATCTTGTTAATGAGGCTCTTAATTTTGTTGAAAGTGGACTGGCAAGCCTCAAAAATAAAGAGAAGCACATCATATGGAGAACCCCATTGGAACTATCTGCACACACTTATGGTAGCCCCCAAGTAACAAATTCCTTTTGGCAGACAATTACCATCACGGCTAGCAGTCCCCACTCAAGATACACTGACCCCAAGGTTTTGGTCTCAAGAACTTACCAGGGAACATCATTTGCGGGGCCTCGATTGGAAAATGGACATAATTGTGCCTGGTGGATGGTTGACCTTGGCAAAGATCATCAGCTCATTTGCTGCTACTACACCTTGCGACAGGACGGTTCCAGGGCCTTCATGAGATTTTGGAATTTCCAGGGGTCTCTGGATGGGAAGAGCTGGACGAATTTGAGGGTACATGAAAACGACAAGACAACCTTTAGACATAAGCAGTTTATTGCCAAACAGCACTCTGTCTGTCTGTCTGACATCTGTCTACGAAAACCACCGAGGAAGCAATGGATTCTGTTTTCCGTCAAAAAGATCAATATCCAAGAGGGGGAGGTCAAGTACAAGATATCAACTGCTTTGACTGATGACAAGTCAACAATGCCATCCCTTGAGGATGACGTAGAGAATATTGGCATCTTCCGCATTGATCCAGGCCTAGAACCATATAAAGATCACTTCAGATATAGAGTGAAGAGAGATGTAGATCAGAAAAGGCTCATTTGTGCTCATTGTTATTTGAAATTTGGGTTCAACAGAGAAGACGATGGCATTGTATACCGTAAGTGGGCACCTGCTGCTCAGTATCAGTTCAAATATTCGAGGCCACCGAAGCCCAATGCCCCACGGATATATGAGGCTCATGTAGGAATGAGTAGCTCTGAATCCCGAATAAATTCATACCGAGAATTTGCAGATGATATTTTGCCCTGTATTCAAGCAAATAACTATAACACAGCCCAGTTGATGGCTGTGATGGAGCAGTCCTATTATGCGTCCTTTGGTTATCATGTTTTGATGGATGTTGTCCATAGTCATGCCAGTAATAATGTTACTGATGGACTCAATGGCTTTGATGTTGGCCAACTTTCCCAGGATTCTCACTTCCACTGTGGAGACAGAGGCTATCATAAACTGTGGGATAGTAGACTCTTTAATTATGCCAATTGGGAAGTTCTTCGTTTTCTTTTATCTAATTTACGGTGGTGGATTGAGGAGTTCAAATTTGATGGGTTTCGGTTTAATGGAGTAACATCGATGCTAGGAGGTATTGGTTTTGACTATCGTCTGGCTATGACCATTCCAGACAAATGGATTGACTACCTGAAGAACAAGAAAGATGACGAATGGTCCATGAAGGACATCGGTTGGAGTTTGACAAATAGGAGATACACTGAGAAGTGTGTGTCTTATGCAGAAAGTCATGACCAGGCCATCGTGGGGGACAAGACTATAGCATTTCTCCTTATGGATAAAGAAATGTATGCTAGCATTTCTTGCTTGACAGATGCTTCTCCTACAATTGAGCGAGGGATTGCTCTTCACAAGATGATACACTTCTTAACCATGGCATTAGGTGGGGAAGGCTACCTTAATTTCATGGGCAATGAGTTCATGAATGCGTTTGACAGAGCTATGAACTTTCTAGGTGACAAATTTTCATTCCTCTCATCAACAAAACAAATCGTGAGCAGCACAAATGAAGAAGAAAAGGTGTTACTTCTCCATATGATCATTAACATTTTTTTTTCTGAGAGCACTATGCTGGTTGATTATCTGATAAATTTTTCAAGTCAATTAAGCTGTGGTATGATTCCATGA 3282 0.4211 MNIQMIEKKEEFLIVAPFECAWRKDLKFREADRGCVVFEAFELNDITLFFRENVGSRHYHYKRDSSPHYTVILGSHRNRRLRIEVDGKTVVDVAGAGLCCSSSFQSYWISIYDGLISIGKGKYPFQNIVFQWLDSNPNYNVQYIGLCSWDKHVGYRSVNVLSLTQSYVPVEALERPVPAHKAILSACGDFPLASSFSVISLPTVTHPVFHALLQYIYAGWTEIPLEQLGSLRALSLQFEVTPLVKQCEETMERFKLNQKFVSGKNVELSFPSTRPHCCSTLPPLTVSSQRLKQLQLTGQYSDVNGYIEGYGLVAQAHKIVLSLWSIPFAKMFTNGMSESMSSEITLRDVPPEAFKAMFDFLYGGKLNDEVNIDCGSLLLELLLLADQFGVTLLHQECCKMLLECLSEVDSLSPLLQVISLIPSCRHIKETCQWKFSMNFDFCTSASTDFVLLDDTTFSNIIQHPDLTVTSKEKLQSSNISRHVLVFQNLVNEALNFVESGLASLKNKEKHIIWRTPLELSAHTYGSPQVTNSFWQTITITASSPHSRYTDPKVLVSRTYQGTSFAGPRLENGHNCAWWMVDLGKDHQLICCYYTLRQDGSRAFMRFWNFQGSLDGKSWTNLRVHENDKTTFRHKQFIAKQHSVCLSDICLRKPPRKQWILFSVKKINIQEGEVKYKISTALTDDKSTMPSLEDDVENIGIFRIDPGLEPYKDHFRYRVKRDVDQKRLICAHCYLKFGFNREDDGIVYRKWAPAAQYQFKYSRPPKPNAPRIYEAHVGMSSSESRINSYREFADDILPCIQANNYNTAQLMAVMEQSYYASFGYHVLMDVVHSHASNNVTDGLNGFDVGQLSQDSHFHCGDRGYHKLWDSRLFNYANWEVLRFLLSNLRWWIEEFKFDGFRFNGVTSMLGGIGFDYRLAMTIPDKWIDYLKNKKDDEWSMKDIGWSLTNRRYTEKCVSYAESHDQAIVGDKTIAFLLMDKEMYASISCLTDASPTIERGIALHKMIHFLTMALGGEGYLNFMGNEFMNAFDRAMNFLGDKFSFLSSTKQIVSSTNEEEKVLLLHMIINIFFSESTMLVDYLINFSSQLSCGMIP 1093
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele27g2068 1093 ProSiteProfiles BTB domain profile. 301 370 IPR000210 GO:0005515
Lele27g2068 1093 Gene3D - 535 645 - -
Lele27g2068 1093 Pfam F5/8 type C domain 538 629 IPR000421 -
Lele27g2068 1093 Gene3D Potassium Channel Kv1.1; Chain A 168 268 IPR011333 -
Lele27g2068 1093 Pfam Farnesoic acid 0-methyl transferase 57 153 IPR022041 -
Lele27g2068 1093 ProSiteProfiles BTB domain profile. 164 225 IPR000210 GO:0005515
Lele27g2068 1093 Gene3D Glycosidases 688 825 - -
Lele27g2068 1093 Gene3D Glycosidases 826 908 - -
Lele27g2068 1093 Gene3D Glycosidases 909 1027 - -
Lele27g2068 1093 CDD BTB_POZ_ZBTB_KLHL-like 316 371 - -
Lele27g2068 1093 PANTHER OS05G0345500 PROTEIN 172 474 - -
Lele27g2068 1093 SUPERFAMILY (Trans)glycosidases 771 1027 IPR017853 -
Lele27g2068 1093 Pfam BTB/POZ domain 291 403 IPR000210 GO:0005515
Lele27g2068 1093 Pfam BTB/POZ domain 174 252 IPR000210 GO:0005515
Lele27g2068 1093 SMART BTB_4 166 255 IPR000210 GO:0005515
Lele27g2068 1093 SMART BTB_4 301 405 IPR000210 GO:0005515
Lele27g2068 1093 Gene3D Potassium Channel Kv1.1; Chain A 280 435 IPR011333 -
Lele27g2068 1093 SUPERFAMILY POZ domain 288 402 IPR011333 -
Lele27g2068 1093 CDD BTB_POZ_ZBTB_KLHL-like 174 238 - -
Lele27g2068 1093 SUPERFAMILY POZ domain 174 252 IPR011333 -
Lele27g2068 1093 SUPERFAMILY Galactose-binding domain-like 537 621 IPR008979 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele27g2068 Lele-ChrLele27 24582563 24596588 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele27g2068 746 908 Glycoside Hydrolase AT2G36390 51.813 1.17e-54 204
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Lele27g2068 BTB 2.7e-17 CL0033
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g0016 25 111911 117330 Lele27g2068 27 24582563 24596588 hybridization
Lele26g0024 26 147892 153306 Lele27g2068 27 24582563 24596588 hybridization