Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele27g2059 ATGGAGGAAATAGATGCAAGAAGTGGATTCTGCAAATCCAACTCCGTCTTCTACAGTAAACGGAAGCCCCTGCCGCTTCCTCAAAACTATTCGCTGGACGTCACCACTTTCATCTCCTCTCGCGCCCACCATGGCAAGATTGCTTTCATTGATGCCGCCACTGGTCGCCACTTCACCTTCCACCAACTGTGGCGAGCCGTCCATGCCGTCTCCACCTCTCTCTCTGACTTGGGTATTCGAAAGGGCCATGTCGTCCTCCTTCTTTCCCCCAACTCCATCTACTTTCCCGTCGTCTGCCTCGCCGTCATGTCCCTTGGCGCTATCATCTCCACAACCAACCCTCTCAACACCCCCGGCGAAATCGCCAAGCAAATCTCCGATTCCAAACCTGCCCTTGCCTTCACAATTCGCCCTCTACTTCCCAAGATCACCGCTGTTCCAAACTTACCGATCGTTCTCATGGAGGAAGACTCCAACCCCCCAATCACGGAGCCTAAAATCGTGACCACGCTGAGCAAGATGATGAAGACGGAGCCCCGTCCGAGCCAAGTCAGGGATCGAGTTTACCAAGACGACACTGCAACTTTACTGTATTCATCGGGCACCACGGGTCCAAGTAAAGGCGTGGTCTCGTCGCACCGGAATCTGATGGCGATGGTCCAGATAGTTTTGGGTCGATTCAACATGGACAAGGAGGAGACCTTCATATGCACCGTCCCTATGTTCCACATATATGGTCTGGTGGCGTTCGCAACGGGCCTTCTGGCTTCAGGATCGACAATAGTGGTGCTGTCCAAGTTCGACATGGACGATATGCTATCAGCGATCCAGAAGTATCGGGCGACATACCTGCCGCTAGTGCCGCCTATATTGGTGGCGATGATGAACGGTGCGGATGCGATCAAGGCGAAGTACGACTTGAGCTCGCTACATTCGGTTCTATCGGGTGGGGCTCCACTGAGCAAGGAGGTGATCGAGGGCTTTGTGGACGAGTTCCCGCACGTCACAATTCTCCAGGGTTACGGGTTGACCGAATCCACGGGAGTCGGGGCATCCACGGATTCACTAGAGGAGAGTCGGAGGTACGGCACGGCTGGGCTGTTGTCACCGGCCACCGAGGCCAGAGTCGTGGACCCCGAAACGGGAGAAGCTTGGCCGCCAAACCGGACCGGCGAGCTCTGGCTCAGAGGTCCCACTATCATGAAAGGTTATTTCAGTAACGAGGAAGCGACCAGCTCGACCCTTGATTCAGAGGGATGGTTGAGAACTGGAGATATTTGCTACATTGATGGCGATGGATATATTTTCATTGTCGATCGGTTGAAAGAGCTTATTAAATACAAGGGATATCAGGTGCCACCAGCAGAACTAGAGGCCTTGTTGCTTACTCATCCTGCAATTTCAGATGCTGCTGTCATACCATTCCCAGATAAGGAGGTTGGGCAGTATCCAATGGCATACGTAGTAAGGAGAAGTGGAAGCCACGTATCTGAGAAGGAAATTATGGAGTTTGTGGCGGCACAGGTTGCTCCGTATAAAAGAATTCGAAGAGTGGCGTTTATTTCTTCGGTACCCAAGAACCAATCCGGCAAAATCCTCAGGAAGGATCTCATCAAGCTCGCCACATCTAAACTCTGA 1638 0.5269 MEEIDARSGFCKSNSVFYSKRKPLPLPQNYSLDVTTFISSRAHHGKIAFIDAATGRHFTFHQLWRAVHAVSTSLSDLGIRKGHVVLLLSPNSIYFPVVCLAVMSLGAIISTTNPLNTPGEIAKQISDSKPALAFTIRPLLPKITAVPNLPIVLMEEDSNPPITEPKIVTTLSKMMKTEPRPSQVRDRVYQDDTATLLYSSGTTGPSKGVVSSHRNLMAMVQIVLGRFNMDKEETFICTVPMFHIYGLVAFATGLLASGSTIVVLSKFDMDDMLSAIQKYRATYLPLVPPILVAMMNGADAIKAKYDLSSLHSVLSGGAPLSKEVIEGFVDEFPHVTILQGYGLTESTGVGASTDSLEESRRYGTAGLLSPATEARVVDPETGEAWPPNRTGELWLRGPTIMKGYFSNEEATSSTLDSEGWLRTGDICYIDGDGYIFIVDRLKELIKYKGYQVPPAELEALLLTHPAISDAAVIPFPDKEVGQYPMAYVVRRSGSHVSEKEIMEFVAAQVAPYKRIRRVAFISSVPKNQSGKILRKDLIKLATSKL 545
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele27g2059 545 FunFam 4-coumarate--CoA ligase 2 443 544 - -
Lele27g2059 545 Pfam AMP-binding enzyme 41 447 IPR000873 -
Lele27g2059 545 CDD 4CL 26 537 - -
Lele27g2059 545 Pfam AMP-binding enzyme C-terminal domain 456 531 IPR025110 -
Lele27g2059 545 ProSitePatterns Putative AMP-binding domain signature. 196 207 IPR020845 -
Lele27g2059 545 Gene3D - 14 442 IPR042099 -
Lele27g2059 545 FunFam Long-chain-fatty-acid--CoA ligase FadD 18 442 - -
Lele27g2059 545 Gene3D - 443 544 IPR045851 -
Lele27g2059 545 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 10 539 - -
Lele27g2059 545 SUPERFAMILY Acetyl-CoA synthetase-like 40 543 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele27g2059 Lele-ChrLele27 24523589 24525735 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele27g2059 4 545 Monolignol Biosynthesis Gene Families AT1G20500 64.534 0.0 725