Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele27g2045 ATGTCCCGGAGGCTGCGGTTCCTTCATGGCTTTGAGGATGAGCTCTGGACGCATTTCTATCGAATTCCAGTTAGGTATGCTGTGGATATGAACGTCGAGAGAGCTCAAGATGTCATTGTGCATAAAAGGTTGCTTCATATGGCACATGATCCCGCTACCAGACCTGCTGTTGAAGTCCGTCTAGTTCAGGTTCGATCTCCTTCTGGTGTGAATTCTAGCGATTCTCTTCATTCAAACTCACAAAGAAAAGCCAGTCATCAAGATTCTCATATTACAGGCAATATGAGGCATGGTTATTTGAATATATTTACTGAAAAGCTAAATATCATTCATCCTGCTCCGACCTTCGGTTCCTCAGCTAACTTTGAACTTGCTCTTGAAGCAAGCCAGTTAAGAGTTCAATCTAATAGTGGCAATTCGAAATTCTATACACAATATTCCGTAGCAATCAATGTTTGTGAAGGAACGAACTATTTGCATCAGAATGACATCATACACAGGGACCTAAAAACCGGGAATCTTTTGATGGATGAGAATGGGGAGGAAGTAGGAAGTGATATGCTGTTGCTTTTACCACACAATAAATTGATTGTAATAACCTGTGCTTCGCTTGATATATGGAAGGTTATTGAACACAAACCATATAATCACAAAGCCGATGTGTTCAGCTTTAGAATTACTCTGTGGGAGCTGCTCACGGGGAAGGTTTTGAGACCCAAAATTTCGAGGCGTACACATCCAATGTTAGTAGAGTTGATGAACCGTTGCTGGCACCAAGACCCTTCTTTCAGACCCGAATTCTCAGAAATTCTGGAATGTCTGCGCCATTTCCCCCAGAATCTCTCTGGTCAAGTACCAGCAGTCAAGGACGAGAGCATTTCCCTCTTCGGTAAGTGCATCGAGTTCTCTTTAATTCTCCAATTTGTTGTTTGTTTGGTTATCTCAAGTCCCATGAACTCAGAGTCGAGAGCGATATGCCGATACATTATCCGGAGAAGGGGAACAAGGCACTGAAGGATGTGCCCAGGTGGTGGTCAGAGATTTCCACTCGAGATTCCTGGGAACAGGTGGTCGATATGCAGAACACTAACAGTTGATGCTGATCTGATTCGCCTTCTGCTTATTTGCCTCAATTCTCAATCATGTTGTTTGCCTGAGATGACCATAAATTTCATTCTCCATTGCTTCTAA 1191 0.4299 MSRRLRFLHGFEDELWTHFYRIPVRYAVDMNVERAQDVIVHKRLLHMAHDPATRPAVEVRLVQVRSPSGVNSSDSLHSNSQRKASHQDSHITGNMRHGYLNIFTEKLNIIHPAPTFGSSANFELALEASQLRVQSNSGNSKFYTQYSVAINVCEGTNYLHQNDIIHRDLKTGNLLMDENGEEVGSDMLLLLPHNKLIVITCASLDIWKVIEHKPYNHKADVFSFRITLWELLTGKVLRPKISRRTHPMLVELMNRCWHQDPSFRPEFSEILECLRHFPQNLSGQVPAVKDESISLFGKCIEFSLILQFVVCLVISSPMNSESRAICRYIIRRRGTRHXRMCPGGGQRFPLEIPGNRWSICRTLTVDADLIRLLLICLNSQSCCLPEMTINFILHCF 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele27g2045 396 Pfam Protein tyrosine and serine/threonine kinase 129 236 IPR001245 GO:0004672|GO:0006468
Lele27g2045 396 Gene3D Transferase(Phosphotransferase) domain 1 123 294 - -
Lele27g2045 396 ProSitePatterns Serine/Threonine protein kinases active-site signature. 164 176 IPR008271 GO:0004672|GO:0006468
Lele27g2045 396 SMART serkin_6 39 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele27g2045 396 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 140 277 - -
Lele27g2045 396 SUPERFAMILY Protein kinase-like (PK-like) 143 281 IPR011009 -
Lele27g2045 396 MobiDBLite consensus disorder prediction 68 90 - -
Lele27g2045 396 ProSiteProfiles Protein kinase domain profile. 1 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele27g2045 Lele-ChrLele27 24441287 24447234 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele27g2045 141 277 MAP Kinase Kinase Kinase AT2G17700 47.799 1.47e-37 140
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Lele27g2045 PK_Tyr_Ser-Thr 3.3e-12 CL0016