Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele27g2043 ATGGTCCAGCTAAGTAGCAGCTGCTACCGTGTCTCAATCCCTTCTTCTATGGCTTCCATCACCAATTTCGTCGTCAAATCACCCTTCTCCCTCTCCACCCACCACTCCAAGCTCCTCCCCCCTCATTCCCGTTCTTCTTTACCTTTTCTGACGCCTCATACTCCTCCGCCAGCCGCCCTCAGAACCACCCACCACACCCGCTTCATCACAAGAGCCACGGCTGCCCCCGGCGCCAAGAAAGTTCTAAGCGACGAGAGAGTTCAAAAGGTCCACAGCATCGAAGAATTCGACCAAGCCCTTCGAACTGCCAAGGACAGACTGGTGGTGGTAGAATACGCAAGCAGGGACAGCGATGAGAGCGGCAAGATATACCCTTTCATGGTGGAACTGAGCCGATCGTGCGGCGACGTGGACTTCCTTCTGGTGATGGGCGACGAATCGGAGAAGACGAGAGAGCTGTGCAGGAGAGAAAAGGTGGATAAAGTGCCTCACTTTAGCTTCTACAAGAGCATGGAGAAGATACACGAGGAGGAAGGGATCGGTCCGGATCAGCTGATGGGAGACGTGTTATACTACGGAGATAACCACTCCGAGGTGGTACAGCTGCACAGCGGAGAGGATGTGAATAAGCTGATAGAGGATCACAGGGCCGACCACAAGCTGATCGTCCTGGATGTCGGACTCAAGCACTGCGGGCCCTGCGTGAAGGTGTATCCCACGGTGCTGAAGCTGTCTAGGCAGATGTCTGACTCGGTGGTGTTTGCCAGGATGAACGGGGACGAGAACGACAGCTGCATGCGGTTCTTGACGGACATGAACGTGGTGGAGGTGCCTACGTTTTTGTTCATCAGAGACGGTAAGATTAATGGAAGGTATGTGGGTTCTGGAAAAGGTGAACTTATTGGCGAAATCCTGAGGTACCAAGGGGTCCGTGTCACTTATTAG 945 0.5376 MVQLSSSCYRVSIPSSMASITNFVVKSPFSLSTHHSKLLPPHSRSSLPFLTPHTPPPAALRTTHHTRFITRATAAPGAKKVLSDERVQKVHSIEEFDQALRTAKDRLVVVEYASRDSDESGKIYPFMVELSRSCGDVDFLLVMGDESEKTRELCRREKVDKVPHFSFYKSMEKIHEEEGIGPDQLMGDVLYYGDNHSEVVQLHSGEDVNKLIEDHRADHKLIVLDVGLKHCGPCVKVYPTVLKLSRQMSDSVVFARMNGDENDSCMRFLTDMNVVEVPTFLFIRDGKINGRYVGSGKGELIGEILRYQGVRVTY 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele27g2043 314 SUPERFAMILY Thioredoxin-like 192 301 IPR036249 -
Lele27g2043 314 Gene3D Glutaredoxin 192 308 - -
Lele27g2043 314 PANTHER THIOREDOXIN-LIKE PROTEIN CDSP32, CHLOROPLASTIC 17 314 IPR044192 GO:0016671
Lele27g2043 314 Pfam Thioredoxin 214 299 IPR013766 -
Lele27g2043 314 Gene3D Glutaredoxin 75 191 - -
Lele27g2043 314 SUPERFAMILY Thioredoxin-like 83 184 IPR036249 -
Lele27g2043 314 CDD TRX_CDSP32 91 193 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele27g2043 Lele-ChrLele27 24431173 24434088 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g0046 25 280538 281434 Lele27g2043 27 24431173 24434088 hybridization
Lele26g0055 26 309753 310649 Lele27g2043 27 24431173 24434088 hybridization