Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele27g2039 ATGGGACTTGGTTTCTTCAAGGCGCTTTGCTGTAGCAACGATCATCATGAAATTCACATCGACTCGTCGGACTCCTCTCCCGGCCGGCCTCCCAGGCAGAGGTCCAGGGAACATCAACATGACGTCGTCAAACCAGCACCTGTTTCAAATTATTCCAAGCCCAAACCAACGGCTGCTCATTCGCAAGCACAAATAGGGCCGGTGCTGGGCAAGCCCTACGTGGACATAAGTATGATGTACGAGCTGGATAAAGAGCTGGGGAGAGGGCAGTCGGGGGTGACATATCTGTGCACAGAGAAGACGACGGGGAAAAAGTACGCGTGCAAGAGCATAGCGAGGAGGAAGCTGACGAGGAAGGAGGAAATAGAGGACGTGCGAAGAGAGATACTGATACTGCAGCATCTGTCGGGGCAGCCAAACATTGTGGAATTCAGGGGCGCATACGAGGACCGGCAGAACGTGTACCTGGTCATGGAACTGTGCACCGGAGGAGAGCTGTTTGATCGCATCATCGCCAAAGGCAATTATTCCGAGAAGGAAGCCGCGGCGCTGTTGCGGCAGATCGTGACGGTGGTTCATGTGTGCCATTTCATGGGAGTCATGCATCGGGACCTGAAGCCTGAGAATTTCTTGATGGCCAGCGAGCACGATCACGCCCCGATCAAAGCCACCGATTTTGGACTCTCCGTCTTCATTGAGCTCGGTGTGTCCTCGATCTCTCTTCTCCTGCTCCTTATTCATCACTTTCGTACTAGTATATACTTAATTGCTGGTGGGATAGGCGCCTTGGGGGTGGGTAGAAATGGAATTAGAATATTGTGGTTTAATTTGGTGGGGCCCGGGCGGAGGGCAGAGAGTATAATAAAACGAGAGCGAAACGCATGGCTGTGTAACGGAAGTGTTAACAAAAAGGGAATGATGCTGAGGAGGACCATGGCGGGGAGGGGGACAAAGCCGGGCATCCCTTGA 969 0.5294 MGLGFFKALCCSNDHHEIHIDSSDSSPGRPPRQRSREHQHDVVKPAPVSNYSKPKPTAAHSQAQIGPVLGKPYVDISMMYELDKELGRGQSGVTYLCTEKTTGKKYACKSIARRKLTRKEEIEDVRREILILQHLSGQPNIVEFRGAYEDRQNVYLVMELCTGGELFDRIIAKGNYSEKEAAALLRQIVTVVHVCHFMGVMHRDLKPENFLMASEHDHAPIKATDFGLSVFIELGVSSISLLLLLIHHFRTSIYLIAGGIGALGVGRNGIRILWFNLVGPGRRAESIIKRERNAWLCNGSVNKKGMMLRRTMAGRGTKPGIP 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele27g2039 322 ProSiteProfiles Protein kinase domain profile. 80 322 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele27g2039 322 ProSitePatterns Protein kinases ATP-binding region signature. 86 109 IPR017441 GO:0005524
Lele27g2039 322 ProSitePatterns Serine/Threonine protein kinases active-site signature. 200 212 IPR008271 GO:0004672|GO:0006468
Lele27g2039 322 Pfam Protein kinase domain 80 235 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele27g2039 322 MobiDBLite consensus disorder prediction 18 62 - -
Lele27g2039 322 SMART serkin_6 80 307 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele27g2039 322 PANTHER SERINE/THREONINE-PROTEIN KINASE 79 231 - -
Lele27g2039 322 FunFam Calcium-dependent protein kinase 1 82 165 - -
Lele27g2039 322 Gene3D Phosphorylase Kinase; domain 1 82 165 - -
Lele27g2039 322 Gene3D Transferase(Phosphotransferase) domain 1 166 249 - -
Lele27g2039 322 SUPERFAMILY Protein kinase-like (PK-like) 80 236 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele27g2039 Lele-ChrLele27 24420615 24421583 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele27g2039 47 235 EF-hand Containing Proteins AT5G12180 64.550 1.06e-85 265
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Lele27g2039 Pkinase 7.3e-43 CL0016