Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele27g2033 ATGTTTACTGCCCCGGATTCTTCCTCTGATAATCACTCGCCGACTAGTGCTGGGGATACCAATAGCCCTAAGTTCGCGCGAAAAAACCTGCCATCTGCTTGGGCCCAAGTTGTACGAGGTGGGGATTGCGAATCTCGTCCATCGCCGCCCTCATCATCTTCCTCTTCGTCATCCCTAACGAACTGCGTGCCCGACCAACCACCATTCTCTGATTTTCCTCAGAAGGAGGCACCTACGTCGCTGGTGCCGGATAACTCTAATGCTGCTGGCGCAGATGCTTACGACGCCAATGCGGGTCGTTCTAAGAGGCCCGCCTGGAGCAAGCCTTCTAACGGCGTTGTCGAGGCTGGTCCAGTAATGGGTGCTGTTTCTTGGCCCGCATTATCTAAATCCACGAAGGTTTCGACCAAAATATCAGCTGAATCAGCTGACTCCACGTCTAAGACTGCATTTGATGGATCACTCCCCACTTCTCAGGGGTCTGGCACTTTACAATCCCCTCAAAAGCAACCTACTAACAATGCAAAGCCTAACTCTGCAACAAACTATGCTGTGCATCATAGACAAAGGTCAATGAAGCGTGGAGGTAGCAACAGCATTGGGGTTGGTCATGCTCAGAGCAGCTTTTCTAACCCTCCCCCACCTCCGCCGCCGCCGCCCTTTCCTGTATTTCCTATACCGGCAACTAGCTATGGTAATGTGGTGCCAGATCATCCTCCAAGGGAAATCCCTTACAGGAACAATAACTGGGATACAAGACCACCTGTTGGGGGTTTTGTGCCTGCTGTGAATGATCACTGGAATCCCCCCCGCAGAGGCAACTTTGGGCCCCATCAACGTGGGGATGGATCCTATCATAATAATCATGGGAATAGGCGTGACCAGGATCGAGGAAATCATGCAAACACTAGAGATGCTCAAGCACACCAGCAGAGGATGTCTCCTAGGGGATTAGTGAGGCACCCGCCTCCTAATACTCCTGCATTTGTTGCCCCTCCACCCATGGGACCCTTTGCAAACCCCATGGGTTTTCCAGAATTTTATTATTTCCCAACTCTACCACTAGAGCCATTCAGGGGGATGCCGTTCATTACTCATGGTCCTCCTCCTGCCATGTTTCTCCCTGCTGCAGAACCTGCTTTGACAAATATGTTAATGAACCAAATTGATTACTACTTTAGTGATGCTAATCTAGTGAAAGATGAGTTTTTAAAATCCAACATGGATGAACAGGGTTGGGTTCCTGTTGCTTTGATAGCAAACTTTCGTCGGGTTAAAAGTTTGACAAACAACATTCAGGTGATACTGGATTCGTTGAGAAATTCTACAGTTGTGGAAGTACAGGGTGACAAGTTGCGGAGGCGTCATGATTGGATGAAGTGGCTGCTCTCATCTCAGCTTCGGGCTGATTCTGGTTCATTATCTCCTGTTGGATCAAGTGGCAATAACCTAGCATCCGATTTTCAAAAGATTGCTCTGGGTGAAGCTGCTACGGATAAAGGTAATTCAGACCCTATGTCAGAGGCCCTTGAAGGATTATCCCCAACAGATTCTTCCAGTCAATCTCAACTTCCAAATGGTGATACTACAGGGAACACCAATTAA 1605 0.4872 MFTAPDSSSDNHSPTSAGDTNSPKFARKNLPSAWAQVVRGGDCESRPSPPSSSSSSSSLTNCVPDQPPFSDFPQKEAPTSLVPDNSNAAGADAYDANAGRSKRPAWSKPSNGVVEAGPVMGAVSWPALSKSTKVSTKISAESADSTSKTAFDGSLPTSQGSGTLQSPQKQPTNNAKPNSATNYAVHHRQRSMKRGGSNSIGVGHAQSSFSNPPPPPPPPPFPVFPIPATSYGNVVPDHPPREIPYRNNNWDTRPPVGGFVPAVNDHWNPPRRGNFGPHQRGDGSYHNNHGNRRDQDRGNHANTRDAQAHQQRMSPRGLVRHPPPNTPAFVAPPPMGPFANPMGFPEFYYFPTLPLEPFRGMPFITHGPPPAMFLPAAEPALTNMLMNQIDYYFSDANLVKDEFLKSNMDEQGWVPVALIANFRRVKSLTNNIQVILDSLRNSTVVEVQGDKLRRRHDWMKWLLSSQLRADSGSLSPVGSSGNNLASDFQKIALGEAATDKGNSDPMSEALEGLSPTDSSSQSQLPNGDTTGNTN 534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele27g2033 534 MobiDBLite consensus disorder prediction 512 534 - -
Lele27g2033 534 SMART la 379 457 IPR006630 -
Lele27g2033 534 MobiDBLite consensus disorder prediction 256 321 - -
Lele27g2033 534 MobiDBLite consensus disorder prediction 1 225 - -
Lele27g2033 534 MobiDBLite consensus disorder prediction 285 303 - -
Lele27g2033 534 PANTHER LUPUS LA PROTEIN-RELATED 122 463 IPR045180 -
Lele27g2033 534 Gene3D - 375 462 IPR036388 -
Lele27g2033 534 MobiDBLite consensus disorder prediction 1 27 - -
Lele27g2033 534 SUPERFAMILY "Winged helix" DNA-binding domain 374 463 IPR036390 -
Lele27g2033 534 MobiDBLite consensus disorder prediction 495 534 - -
Lele27g2033 534 MobiDBLite consensus disorder prediction 128 186 - -
Lele27g2033 534 MobiDBLite consensus disorder prediction 46 67 - -
Lele27g2033 534 CDD LAM 383 456 - -
Lele27g2033 534 Pfam La domain 386 441 IPR006630 -
Lele27g2033 534 ProSiteProfiles La-type HTH domain profile. 375 464 IPR006630 -
Lele27g2033 534 MobiDBLite consensus disorder prediction 209 225 - -
Lele27g2033 534 MobiDBLite consensus disorder prediction 194 208 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele27g2033 Lele-ChrLele27 24391227 24395621 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g0053 25 323386 327712 Lele27g2033 27 24391227 24395621 hybridization