Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele27g2014 ATGGCTCTCCTTACTTCCATGCCCCAACAGTCAGATTCAGACCCCAACTCACAAGTTCCAAAACGCAAGCGAAATAAGCCGCAGAAGAAGCAGAAGCAGAAACCACCGTCTTCATGGGACCAAATCAAGAATCTCCTCACCTGCAAACAGATCCAAGGGCCGAGAGTTCACGACCCCTCCAAAAACCCCACCCCAGTGCCCTACTCCAAGCTTGGATCTTCTTGCAGCTCCATCTGCAGCTTCAAGGACGTTTTTCACGGCAACACGCGTGTTGTTCACAGACCTGATAACTCCTCGCCGGAGAGCAATGCTCTGGGTCAGCAGGCTGGGTTACCGAGCCGGAAACCCCCGAATAACTCGTCATCTCGGCCGGCCAAATCCAGCAGCGCTCCAAACTGCACTACATCTTCCAGAGGGACGCAATTCAGGAAACTCTCCGGCTGTTACGAATGTCGCATGATTGTTGACCCTTCCAGGCTCCCGATTCCGAGAAGCACTCTATGTTCTTGCCCTCACTGTGGAGAGGTCTTCCCTAAGATGGAAAGCTTGGAGCTTCATCAAGCCACTCGCCACGCCGTTTCAGAGCTGGGCCCGGAGGATTCGGGTCGAAATATTGTGGGGATAATATTCAAATCAAGCTGGCTGAAGAAGGGCAGCACCATTTGTAAGATCGAACGGATACTCAAAGTCCACAACACCCAGCGCACCATCCAACGGTTCGAGGAGTGCCGAGACGCAGTGAAGAGCCGCGCTCAGTTCAGCGTCAAGAAGAACCCCAGGTGCGCCGCCGACGGCAACGAGCTCTTGCGATTCCACTGCACCAGCCTCTCATGCTCCTTGGGTGCACGTGGCTCCTCCTCCTTGTGCGCCTCCCTCCCCGGCTGCGGTGTTTGCACCATCATCCTCCACGGGTTCAAGGGCAAGTCTGATAGTGCCGGCGCCGCTGAACAGCCACACTGCAAAGGAGTGCGGACCACGGCCAGCAGCGGTAGGGAACACGACGCCTTGCAGTGTACCGACACCAGGAGGGCGATGCTGGTGTGCCGTGTCATTGCAGGGAGGGTGAAGCGCGTGGCGGAGGAGATGCCGGCGGAGGAGGAGACTGTGTCGGCTGGTTCTTATGACTCGGTAGCTGGGTGCGCCGGGATCCACTCGAATCTCGAGGAGTTGGTAGTGTTCAATCCAAAGGCTATCCTTCCTTGTTTCGTTGTCATTTACAAAGTGGTGCCATGCACTGAAAACATGGATTGTTCATGTGATGGAAACAGCAATCCCATAAATAAGTGGGCCAGTTGCCATTGCAGTCCCACAGGACACAATTCCAAAGTTCAAATTAATGTTCAGTACTCATGCCTCCTTTCAAACAGCTGGAGTTCTCTCAATCTTCTTTCTCGATCTGTAGTAGTCTACTCTGTATGGGTACCAGGCATGCGACTGTACCTTCACAACAGAGCTTACTGTGAAATCGAGCACAATCCTCAATCCGAGAGCTTCGTCATTTCAGTCATCATTGACTCAGAAGAGGGCCTTCTCCCTCAGCCTCACACCAACCTCCCTTCTCTCGGCTTCAACCTCAACTTTTCCGCCATGAAGCTCTTCACCCGCTTCCGCAAGATCCTTACTCGTCTCGTCTTCCCCTCCGGCAAGGCTTCTTATAAGCACAAACAATCTGACAGTTTTGACCCCCCGAAGACCTCCTGCAGCTCCTATTACTCCTCTTACTCCCACTACAATGAGGCCATTTCTGACTGCATTGAGTTCTTCAATAAGTCCGCACAAGATGGTTTCCTCCAGCCTCGTCATTCCGATGTCGTCTGA 1818 0.5347 MALLTSMPQQSDSDPNSQVPKRKRNKPQKKQKQKPPSSWDQIKNLLTCKQIQGPRVHDPSKNPTPVPYSKLGSSCSSICSFKDVFHGNTRVVHRPDNSSPESNALGQQAGLPSRKPPNNSSSRPAKSSSAPNCTTSSRGTQFRKLSGCYECRMIVDPSRLPIPRSTLCSCPHCGEVFPKMESLELHQATRHAVSELGPEDSGRNIVGIIFKSSWLKKGSTICKIERILKVHNTQRTIQRFEECRDAVKSRAQFSVKKNPRCAADGNELLRFHCTSLSCSLGARGSSSLCASLPGCGVCTIILHGFKGKSDSAGAAEQPHCKGVRTTASSGREHDALQCTDTRRAMLVCRVIAGRVKRVAEEMPAEEETVSAGSYDSVAGCAGIHSNLEELVVFNPKAILPCFVVIYKVVPCTENMDCSCDGNSNPINKWASCHCSPTGHNSKVQINVQYSCLLSNSWSSLNLLSRSVVVYSVWVPGMRLYLHNRAYCEIEHNPQSESFVISVIIDSEEGLLPQPHTNLPSLGFNLNFSAMKLFTRFRKILTRLVFPSGKASYKHKQSDSFDPPKTSCSSYYSSYSHYNEAISDCIEFFNKSAQDGFLQPRHSDVV 605
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele27g2014 605 FunFam C2H2-like zinc finger protein 192 407 - -
Lele27g2014 605 ProSitePatterns Zinc finger C2H2 type domain signature. 168 191 IPR013087 -
Lele27g2014 605 ProSiteProfiles Zinc finger C2H2 type domain profile. 168 196 IPR013087 -
Lele27g2014 605 MobiDBLite consensus disorder prediction 90 139 - -
Lele27g2014 605 MobiDBLite consensus disorder prediction 48 67 - -
Lele27g2014 605 Gene3D - 185 409 - -
Lele27g2014 605 MobiDBLite consensus disorder prediction 1 16 - -
Lele27g2014 605 SUPERFAMILY ADP-ribosylation 193 409 - -
Lele27g2014 605 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 37 406 - -
Lele27g2014 605 MobiDBLite consensus disorder prediction 92 139 - -
Lele27g2014 605 MobiDBLite consensus disorder prediction 1 42 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele27g2014 Lele-ChrLele27 24283823 24290652 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele27g2014 1 409 C2H2 Transcription Factor Family AT1G75710 59.743 1.06e-163 474
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Lele27g2014 None None None