Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele27g2006 ATGCTCTGCCACACTGCACCCTACTTCGGAGCATTGCGTGAATATAATAGTGGGAAATACTCGATTCAATGTGCTGTCAGCACCGAAGTTTTACTGACAACAGAAAATCATGATCATTTACATTTTAGGGGGTTGCGCGTAAAACCTGGTAGACATTATTGCGCCCTTCTACTGTGTTGCTTTACCGATACCGTTGCAAATTTTGAGATGGACCGGCGGTGGCCCTGGAAGAAAAAATCATCTGACAAGGCAGTGCTTGACAAAGCAGCTGCCGCACTGGACTCTGTTAGCGCTTCCTCCCAGGGCAATCAGGATAACTACAAAAAACCAAACTATGTCCAAATTTCTGTGGAGTCATATTCACATCTGACTGGTTTGGAGGATCAAGTGAAGACATATGAGGAAAAAGTTCAGACTCTGGAGGATGAGATCAAGGAGCTGAGTGATAAGCTCTCAGCGGCAAATTCAGAGATGACAACCAAGGAAAACCTTGTAAAACAACATGCAAAAGTAGCAGAAGAAGCTGTCTCAGGATGGGAAAAGGCTGAAGCAGAAGCTTTGTCATTGAAGAATCATCTAGAATCTGTCACTCTTGCAAAACTCACTGCTGAGGATCGTGCATCACATCTAGATGGTGCTCTTAAAGAGTGCATGCGACAGATAAGAAACCTGAAGGAAGAACATGAAGAGAAAATACAAGAAGTTACTCTCTCTAAAACCAAGCAGTTGGACAAGATTAAGGGGGAGCTTGAGGCAAAGATTGATAACTTAGAACAGGAACTCCTAAGGTCAGCTGCTGAAAATGGGGCTCTTTCAAAGTCTTTGCAGGAGCACTCCAACATGCTAATAAAAATAAGTGAAGAAAAGGCTCAAGCTGAGGCTGACATTGAGCTTCTGAAGGGCAACATAGAATCATGCGAAAGAGAAATCAATTCACTTAAATACGAACTTCATCTTGTCTCCAAAGAGCTTGAAATTCGCAATGAAGAAAAGAACATGAGTATGAGATCTGCAGAAGCTGCCAACAAGCAGCATATGGAGGGGGTCAAAAAAATTGCCAAATTAGAGGCAGAATGCCAAAGATTACGTGGTCTTGTGCGGAAAAAGTTACCCGGTCCTGCAGCACTTGCGCAGATGAAGCTAGAAGTTGAGAGTCTCGGTGGAGAAAATAGACTAAGGAAGTCTCCTGTCAAGCCTGCTAGTCCTCACATGTCTCCTCTGCCTGACTTCTCCTTGGAGAATGCACAGAAATTCCAGAAAGAGAATGAATTTCTTGCGGAGCGTTTATTGGTAATGGAAGAAGAAATTAAGATGCTCAAAGAAGCTTTGACTAAACGTAACAGTGAATTGCAGGCCTCAAGAAGCATGTGCGCAAAAACCTTAAGCAAGCTTCAAACCTTGGAAGCTCAACATCAAACATGTAACCAGCAAAAAGGATCTCCAAAATCCATAACCCGGATGACCCATGAAAGTATTTATAGTCACAATGCAAGCTATGCACCAAGTATAACCTCCATATGTGAAGTGGGAAACGATGATGAATTAAGCTGTGCTGAGTCTTGGGCTACAACATTAATGTCTGAGCTCTCCCAATTTCAAAAGGAAAAGAATACCGTGAAATCAAGCAAACCTGAATCAACAAATCAGTTGGGATTGATGGATGATTTTCTGGAGGTGGAAAAGTTGGCTCATCTATCAAACAATTCTAATGAATATACCTCTGTTTCAATTTCTTCTAACAAGACATCTGAAGTTGTGACCAATGATGTATGGAAGATCAATAATGGCATAGATGATTCTTCTGATAAACAGATTGTTTCAGATCCATTGTCAAATCTGGAGTCTTCTGTTGCAGAGTTGTCAGCACCCGATCCTGGAGCTGATGTTGATGGGTCTTCATTGGCAGAGCTTCAATCAAGAATATTGTCAGTTTTCAAGTCCATGTCTAAGGATTCCGATAAAGGAAAGGTCCTGGAGGATATTAAACATATTCTGGAGGATGGACAAGACACTTTTGTCCAGCACTCTTCAGGTTGCATTTCTCAGGTTGTCCAAACGCTCCAGCCTTCTGATTCTCCATGTGATAGGCATGTTAATCCTGAAGATGCTAGCGTAAGTGCTGAAAAGGATTCCACTTCATCCCAGCAAGCAACAGAATGTGTGCAGATAACTTTAAATATAGAGGCTGCAATTTCCCAGATTCATGACTTTGTATTGTTCTTAGGCAGAGAAGCTATGGCCGTTCATGACACATCTTGTAATGTAGATGGAATGAGCCAAAAGATTGAGGAGTTCGCTGTCACTTTTAATAAAGTTCTACGTAGTGAAGCAAGTTTGTCGGAATTTGTTCTTGACCTGTCTTGTGTTTTAGCAAAAGTGAGCGAGTTCAGATTTAATGTCCTTGGCTACAAGGGTGCAGAAGCTGAAAATAACAGTCCCGATTGCATTGACAAGATTGCCTTGCCAGAAAATAAGTTAACTCAAGATGGTTCCCCTGGAGAGAAATATCAAAATGGTTGTTCTCATATTCTAAATCCTTGTTCTGATCCTGAGGTTCCTGATGATGGAAATCTTGTATCGGCCTTTGAACCAAATGCTACATTCAAAAAATTCTCAATGGAGGAGTATGAAGAATTGAAATTAGAGAAAGAGAAGGCGGCAATGGATCTGTCAAGATGCACTGAAAGTCTTGAAACGACAAAGTCTCAATTACTGGAAACTGAGCAACTTTTGGCGGAAGTTAAATCACAATTGGCTTCCACTCAAAAATCTAATAGCTTGGCTGAGACACAGCTGAAGTGTATGGCAGAGTCATACAGGTCACTTGAAACACGTGCCCATGAGTTAGAAACTGAGCTAAATCTTTTGCTAGTTAAGACCGAGACTCTGGAGAATGAACTTCAAGATGAAAAGAGGGGTCATGAAGATGCTTTGGCCAAGTGTAAGGAGCTAGAAGAGCAATTACAAAGGAATGAGAGTTCAGCAGCTGATGGTGACCAGAAGACCAAGCAGGAGAGGGATCTGGCAGCTGCTGCCGAAAAGCTGGCTGAGTGTCAGGAAACCATTTATCTTCTTGGCAAGCAGTTGAAAGCTTTGCATCCTCAAACAGAGCAAAATGAATCTCCATACGGTGAAAGAAGTCCAAAGGTTGGAGGCTTCCCGGAGGATGAACCTACAACTAGTAGCCCAAATTTGCAAGAACTAGATCAGGCCGAGTTGGAGAATGCTACTTCTGCATATATGCAGAAATTAGGCGGGGGATCGCCTCTACACTTCTCCAACACCGTCTACAGTCCATCAGACAATGAAGCAAACCTTCCGGACAGATCTCCGGTGAGGCCACCAAAACATAGGCCTACGAAGTCAACCTCCTCATCCGCCTCCTCCACTCCTACACCAGAGAAACACGCACGAGGCTTTAGTAGATTCTTTTCATCCAAGGGAAAGAACGGTCACTGA 3459 0.4267 MLCHTAPYFGALREYNSGKYSIQCAVSTEVLLTTENHDHLHFRGLRVKPGRHYCALLLCCFTDTVANFEMDRRWPWKKKSSDKAVLDKAAAALDSVSASSQGNQDNYKKPNYVQISVESYSHLTGLEDQVKTYEEKVQTLEDEIKELSDKLSAANSEMTTKENLVKQHAKVAEEAVSGWEKAEAEALSLKNHLESVTLAKLTAEDRASHLDGALKECMRQIRNLKEEHEEKIQEVTLSKTKQLDKIKGELEAKIDNLEQELLRSAAENGALSKSLQEHSNMLIKISEEKAQAEADIELLKGNIESCEREINSLKYELHLVSKELEIRNEEKNMSMRSAEAANKQHMEGVKKIAKLEAECQRLRGLVRKKLPGPAALAQMKLEVESLGGENRLRKSPVKPASPHMSPLPDFSLENAQKFQKENEFLAERLLVMEEEIKMLKEALTKRNSELQASRSMCAKTLSKLQTLEAQHQTCNQQKGSPKSITRMTHESIYSHNASYAPSITSICEVGNDDELSCAESWATTLMSELSQFQKEKNTVKSSKPESTNQLGLMDDFLEVEKLAHLSNNSNEYTSVSISSNKTSEVVTNDVWKINNGIDDSSDKQIVSDPLSNLESSVAELSAPDPGADVDGSSLAELQSRILSVFKSMSKDSDKGKVLEDIKHILEDGQDTFVQHSSGCISQVVQTLQPSDSPCDRHVNPEDASVSAEKDSTSSQQATECVQITLNIEAAISQIHDFVLFLGREAMAVHDTSCNVDGMSQKIEEFAVTFNKVLRSEASLSEFVLDLSCVLAKVSEFRFNVLGYKGAEAENNSPDCIDKIALPENKLTQDGSPGEKYQNGCSHILNPCSDPEVPDDGNLVSAFEPNATFKKFSMEEYEELKLEKEKAAMDLSRCTESLETTKSQLLETEQLLAEVKSQLASTQKSNSLAETQLKCMAESYRSLETRAHELETELNLLLVKTETLENELQDEKRGHEDALAKCKELEEQLQRNESSAADGDQKTKQERDLAAAAEKLAECQETIYLLGKQLKALHPQTEQNESPYGERSPKVGGFPEDEPTTSSPNLQELDQAELENATSAYMQKLGGGSPLHFSNTVYSPSDNEANLPDRSPVRPPKHRPTKSTSSSASSTPTPEKHARGFSRFFSSKGKNGH 1152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele27g2006 1152 MobiDBLite consensus disorder prediction 1117 1135 - -
Lele27g2006 1152 MobiDBLite consensus disorder prediction 1033 1152 - -
Lele27g2006 1152 Coils Coil 415 442 - -
Lele27g2006 1152 MobiDBLite consensus disorder prediction 1088 1105 - -
Lele27g2006 1152 MobiDBLite consensus disorder prediction 689 713 - -
Lele27g2006 1152 MobiDBLite consensus disorder prediction 986 1006 - -
Lele27g2006 1152 MobiDBLite consensus disorder prediction 1057 1077 - -
Lele27g2006 1152 Coils Coil 207 238 - -
Lele27g2006 1152 Coils Coil 897 917 - -
Lele27g2006 1152 Coils Coil 869 889 - -
Lele27g2006 1152 Coils Coil 123 164 - -
Lele27g2006 1152 Coils Coil 240 267 - -
Lele27g2006 1152 Coils Coil 275 358 - -
Lele27g2006 1152 Coils Coil 932 1021 - -
Lele27g2006 1152 PANTHER FILAMENT-LIKE PLANT PROTEIN 4 70 1147 - -
Lele27g2006 1152 Pfam Filament-like plant protein, long coiled-coil 161 1038 IPR008587 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele27g2006 Lele-ChrLele27 24243492 24248329 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele27g2006 27 24243492 24248329 Lele01g1200 01 7178056 7182198 CCT
Lele27g2006 27 24243492 24248329 Lele02g1469 02 18899628 18903594 CCT
Lele27g2006 27 24243492 24248329 Lele03g1214 03 7145268 7149235 CCT
Lele27g2006 27 24243492 24248329 Lele04g1452 04 19747213 19752857 CCT
Lele25g0080 25 464926 469307 Lele27g2006 27 24243492 24248329 hybridization
Lele26g0091 26 489035 493917 Lele27g2006 27 24243492 24248329 hybridization