Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele27g1999 ATGTTTGCCTTCTTTTCTCATGATTACACCATCATGGATCGTTTTGGGTTCCTTTGGAATCCCCAGTTCAAATTTGACTACCGCTTTGGAGACGGCGTCTCTTTACTCTCACAGTCTCACTGCACTCCGCACTCAAGTAGTAAGAAGCATTTAATTCCGGAAGGAGCTGATCTGCTCCGACTACAAATATCGATCTCCTTCTCCGGTCTGTGTGTAAGTGGCTACGAAACTTGCCCCGAGATGGGTTCTGTTTCTCTTAAAATAGGGGATGGCACTGCCAGATTTAAGCGAGCCACTTTTTGTTCTTCGGCAGTCAACATTCTCATGATCTTCTGTGTTATCACTACCAATCTTTTTGCCCTATATGCTTTCACCGCTTCCCCAAAACACCATAGCAACCACCTGCTTCTCCATACTCAAAAGAACTTCTCTCTCATTTCTGAACAGGTCTCTCTGATACTGAGAGAGATCGATTCGTCCCAGAAAAAATTGGCCCAGATGGAGAAGGAGCTTCTTGGCTATGAAAATGTTGACCTTTCCAGGCCTAATATTGCTAGCGAACTTAAACTCTATCTACAGCACCACCAGCTCCCTCTGGGCAAAGATTCGAGAACTGGGATCACTGAAATGGTCGGCTCTGTTGGTCATTCCTGTGAGAAATCTGCGGATTTATTGTCTCAATACATGAATTACAAGATTGCTGGACCTTGCCCCGACGATTGGAGTTCAGCGCAGAAACTGATCTTGCGCGGATGTGAGCCTTTACCGAGGAGGAGGTGCTTTGCTAAATCTGATTCTAAGGTAGGTCTTTATCCTTTTCCCATTTCCCTTTGGAAACCCGTGGGTAATAAGACTGTTAACTGGAGTGGCCTGGGTTGTAAGAATTTTGAATGTTTGAATGGTAAGCAATTGGGTAGAGATTGCATCGGTTGCTTTGATTTGGTTAATGGCTACGAGAATCAGAGATATGTGAAAGCTAGAGGTAAGAATGATTTTGTCATTGACGATGTGTTGGCATTGGCAAGTGGAGGGATTAGAATAGGGCTCGACATTGGAGGTGGGTCCGGATCCTTTGCGGCTAGAATGGCCGATAGGAACGTCACCGTGATTACCAACACTCTGAACATAGACGCACCATTCAGCGAATTCATTGCTGCAAGAGGGCTTTTCCCTCTGTTCTTAAGCTTAGATCATAGGTTCCCATTCTATGACAATGTGTTTCATTTGGTTCATGCGTCTAGTGCGTTGGATGTTGGAGGGAAGCCTGAAAAACTGCAGTTTTTAATGTTTGACATTGATCGAATTTTGTGTCCGGGTGGCTTGTTTTGGCTGGATAACTTCTACTGTGCCAATGATGAGAAGAAGGCGGCCTTAACTCGTTTAATTGAACGTTTTGGATATAAGAAGTTGAAATGGGTTGTGGGAGAGAAGGTTGATAGTGTGGGATCAGGCAAATCTGAAGTCTTATCTGCTGTGCTTCAGAAGCCTGTAAGAGTGTAA 1500 0.4453 MFAFFSHDYTIMDRFGFLWNPQFKFDYRFGDGVSLLSQSHCTPHSSSKKHLIPEGADLLRLQISISFSGLCVSGYETCPEMGSVSLKIGDGTARFKRATFCSSAVNILMIFCVITTNLFALYAFTASPKHHSNHLLLHTQKNFSLISEQVSLILREIDSSQKKLAQMEKELLGYENVDLSRPNIASELKLYLQHHQLPLGKDSRTGITEMVGSVGHSCEKSADLLSQYMNYKIAGPCPDDWSSAQKLILRGCEPLPRRRCFAKSDSKVGLYPFPISLWKPVGNKTVNWSGLGCKNFECLNGKQLGRDCIGCFDLVNGYENQRYVKARGKNDFVIDDVLALASGGIRIGLDIGGGSGSFAARMADRNVTVITNTLNIDAPFSEFIAARGLFPLFLSLDHRFPFYDNVFHLVHASSALDVGGKPEKLQFLMFDIDRILCPGGLFWLDNFYCANDEKKAALTRLIERFGYKKLKWVVGEKVDSVGSGKSEVLSAVLQKPVRV 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele27g1999 499 Gene3D Vaccinia Virus protein VP39 317 485 IPR029063 -
Lele27g1999 499 Coils Coil 150 177 - -
Lele27g1999 499 Pfam Putative S-adenosyl-L-methionine-dependent methyltransferase 341 467 IPR004159 GO:0008168
Lele27g1999 499 PANTHER S-ADENOSYL-L-METHIONINE-DEPENDENT METHYLTRANSFERASE SUPERFAMILY PROTEIN-RELATED 104 498 - -
Lele27g1999 499 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 329 469 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele27g1999 Lele-ChrLele27 24207091 24209906 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g0085 25 505533 506792 Lele27g1999 27 24207091 24209906 hybridization
Lele26g0096 26 525208 526467 Lele27g1999 27 24207091 24209906 hybridization