Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele27g1997 ATGGGAGGGCCAAGTCTTAGCGATAAATTCTGGAGACCTACCGAGGAGGAATGTCCTTCACAAGTTGGGTTAAATGCTCAAGATCACCTCCAAGCAAAGGCGTCATTACTGTTGCATCCAGGAGGAGCAGTTTCTGATGACATTCTACCTCCTGGCTTTGAGGGAACTCAATCCTCAAGTCAGATGCAGATTAAGCTCTCCCAAATTCCAGTGATTAAATGGACCAATCCACTTAAGGTATGCGTGCACGTGGGGGTCCCCTCTGTCTCAATGGATGTAGAAGACTCCATTTGCAATGATGATCATACTGCTTTGATACCAATTACACCAATTGAAGATGAGGATTCCACAGTAGATGTACCATCTGGAGTGCCACCTAGTTCAGAGCCTCTTTTATATGGTGCTGGAGTACCCAACGGTTCTAACTCTCCTTCAATTACGCAATTACCTCGTGTAGTAGAATCTGAGGCTGCTGAAGCATCTGTAGCTTTAAACCATATCATGAAGAACAATGAACACGGAGTTTTGATCGACCATGAATTACTGAATAAAATTCTCGGCAACCCAGAAGTGATTGAAATGTTGGTTAGAGATTATGGAAATACAAATAACTCACGGCATACATTCAATGCTAGCTCATCCTTGGTGACTTCATGTTCACTCATTCCTCTGAATCAAGCTGAAACCAGTGCACCTTCATTTGGTGCCTTTTCAGCCAACCCTTCCTGTACTGTTCCTCCTCAACGGGCCCCTCCACCTGTAGTTAGTCTTGGAGCACCTCCAGCAAAGGATGTGAACTACTATAAGAGCTTAATTCAGCAACATGGTGGAGATAAACAAGAGACTCTTCCTTATCTGAACAACATTAAACAGCCCGTAGGAAACCAGGAGACACCACATAATTCTAGATTAAGGGAACCAAAACCCAAGATAATGAAGCCTTGTATTTATTTCAACAGTGCAAAAGGATGTCGGAATGGAGCTAACTGTGCATACCAGCATGATGTGGCATTTCAGCCCCGTGGTAGTGCTGTGCCAGGCGTACATAGTTCGAAAAGAACCAAAATGGATAGCGAGATTAGCAATTGA 1089 0.4389 MGGPSLSDKFWRPTEEECPSQVGLNAQDHLQAKASLLLHPGGAVSDDILPPGFEGTQSSSQMQIKLSQIPVIKWTNPLKVCVHVGVPSVSMDVEDSICNDDHTALIPITPIEDEDSTVDVPSGVPPSSEPLLYGAGVPNGSNSPSITQLPRVVESEAAEASVALNHIMKNNEHGVLIDHELLNKILGNPEVIEMLVRDYGNTNNSRHTFNASSSLVTSCSLIPLNQAETSAPSFGAFSANPSCTVPPQRAPPPVVSLGAPPAKDVNYYKSLIQQHGGDKQETLPYLNNIKQPVGNQETPHNSRLREPKPKIMKPCIYFNSAKGCRNGANCAYQHDVAFQPRGSAVPGVHSSKRTKMDSEISN 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele27g1997 362 MobiDBLite consensus disorder prediction 341 362 - -
Lele27g1997 362 ProSiteProfiles Zinc finger C3H1-type profile. 309 337 IPR000571 GO:0046872
Lele27g1997 362 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 6-RELATED 239 357 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele27g1997 Lele-ChrLele27 24199503 24201611 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Lele27g1997 None None None