Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele27g1996 ATGGGAAAATCTATTTCCTGCTTCAAATTAATCACATGCGGCAATGATGCGGCGGACGGCAACGACGATTACCAAGGGTATGAGATCAAAGATTCAAGTGACAAACGAGGTTGGAGTTTCCGAAAAAAATCTGCAAGGCATCGTGTGCTTAGCAATGCTGTAATAACAGACACCCCTTCTTCAGCAAAAAAGGAGAGTTCAGATTGTACTAGTATTAATTTCCAACAATCAGCTGAAACAAATATTGCTGAGAAGAGCCTCACAACAAATTACTCTGATGAGAAACCCCCTCTATTATCCATCACAAACTCACAATTATCTGGAACAGCTGCTACTGAAACTGAGAGCAAGGTGGATATATCTGAAACAGTTGTTAGTGAAACTGAGAGCAAGGTGGATTTATCTGAAACAGTTGTTGTTGAAACTGAAAGCAAGGTGGATTTATCTGGAACAGCTGCTACTGAAACTGAGAGCAGGGTGGATTTATCTGAAACAGTTGTTGCTGAAACTGAGAGCAGGGTGGATTTATCTGAAACAGTTGTTACTGAAACTGAGAGTAAGGTGGATGTCAATCCACCGGAGGCTGTGGTTATCACCATCCAAGTTGCCATCAGAGGGTTCTTGGCCCAGGGAGCCTTGCTAAAGCTTAAGAATGTAGTGAAGTTGCAAGCTGCTGTTCGTGGGCATTTGGTTCGGAGGCATGCTGTAGGAACCCTGCGTTGTGTTCAAGCCATAGTTAAATTGCAGCTCCTCATGCGAGGTCGTCATGCTCAGCAGTTGCATCAAGATAAGCATGGCAAAATTAATGGCTCAGAAATTTTGGGTAATGGAAATCAAGTGAGCAAGTCAAGTGTGAAGTCCACTTCTATGGAGAAACTGCTTAGCAATCGGTTTGCTCATCAGCTGTTGAAATCCACACCAAAAAACAAACCCATCCGTGTCAAATGCGATCCTTCCAAAGCTGATTCTGCTTGGAAATGGTTGGAGAGATGGATGTCTGTTTCCTCATTGGATTCTGCAGAGTCTAAAATGGCAAGTTCAATGGTGGAGCAATCAGACAACAACGAATCTAGCTCTTCTCCATCTCCATTAGAAACTGGGCTCCGGTCTGAAGTTTTTTGTCAGTCAGATGACTCAAAGCTCACTGTTGAGGACTCTGTTGTGCCTTCAGAGGTTGAAGAGAAAGTGACCACTCATGATGCAGGAAACTTAAGCTTCAAAGCAATCCATTCTACGTCTATTGCCAAAGATGATTTGGAACATGCTCTGCCTGAAATGACAGTTACTTTTGATGCTAAAGTAAACTCGGAAGAAATTGATACGCAGCAAAATAAAATTGTGACATCAGATGCAATTGCTCCTCAGGAGTTTAGTTCTCTTCCTGAGAAACCTGAAATTGACAGTGAACAGCCCAAAAGATCGATGAAAAGATTTGCCTCTGAGCAACTAGAGACTGAGGGAACCAAATTTGGGTATGGATCAAGAAAGGTCAGCAATCCAACATTTATTGCTGCACAGTCTAAATTTGAAGAGCTGAGTACAATGGCAAATTCAGGTAGGTCAAGCAGTTTGTCCAATAAAGATGCAACAGTTGAAGCGCATGGGGACCCCAGTTCTGTTGGCACAGACAGTGCATTTAGGTCAAAAGAGCTCTTAGTGGAGAATTCTGCTCCCTTTCCTTTAAGGATTGGTGGCTCTGAATGTGGTACTGAACTGTCTATTTCTTCCACTCTTGATTCACCAGACATATCTGAGATTGGGGCTACGGAAAATGAGCCTGAAGTGAAAGATTTATCAGAAGGGATTCGTAATCCTGACAATGTGATAAATCATGAGGTTGAGGCCACTGTTTTTTGTACCACCCCGGCTTGTGATTTACCCAGCTCTGCACTGGATCAGCCTGAGACTGCCAAGGACAAAGATATCAATGGCAAATCAGTACATTCAGCAGTAGTTGTTGATCCCAAAGAGCCAGCTCTTAAGTCTGAGAAAAACATTTCTGATCTGCAGAAAGAACAAACGGAGTCTGCTGTGCAAGATCTCAGAGCATCTCCTGAAGCTTCACTCAGAAGCCATTTAACTGTCCCTGAATCTCATGGAACACCTTCAAGTCAGGTATCAGTGAAACCTAAAGAGAGAAAACCCGAGAAGTCTGGATCTGGATCAACAAATAAACGAAAGCTTCTGTCAGCTGGTAATAAATTACCTGCAAATGCTACTCCTGATTCAGGATCTAGAGGTAGTAGGGAACAGCTGCCCAAAGATCAGGGTAGTGGGAAGAGGCGCAATTCCTTTGGCTCAGCGAAACCTGATCACATTGATCAAGAATCAAGAGATAATAGTAACAATAGTTCTCTTCCTCGTTTCATGCAAGCCACAGAATCTGCCAGGGCCAAGATTAATGCTAATAATTCTCCACGATCAAGTCCAGATCTGCATGACCGTGAGGTAAATGATAAGAAGAGACACTCCTTGCCTGGTGCAAGTGCAACTGGTAGGCAGGTTTCTCCACGCATCCATCGCTCGATTTCTCAGGCACAGCAGGGTATGAAAGAACAAGGTTTACATCCTCCTCATGAGAGGAAGTGGCAGAGGTGA 2598 0.4349 MGKSISCFKLITCGNDAADGNDDYQGYEIKDSSDKRGWSFRKKSARHRVLSNAVITDTPSSAKKESSDCTSINFQQSAETNIAEKSLTTNYSDEKPPLLSITNSQLSGTAATETESKVDISETVVSETESKVDLSETVVVETESKVDLSGTAATETESRVDLSETVVAETESRVDLSETVVTETESKVDVNPPEAVVITIQVAIRGFLAQGALLKLKNVVKLQAAVRGHLVRRHAVGTLRCVQAIVKLQLLMRGRHAQQLHQDKHGKINGSEILGNGNQVSKSSVKSTSMEKLLSNRFAHQLLKSTPKNKPIRVKCDPSKADSAWKWLERWMSVSSLDSAESKMASSMVEQSDNNESSSSPSPLETGLRSEVFCQSDDSKLTVEDSVVPSEVEEKVTTHDAGNLSFKAIHSTSIAKDDLEHALPEMTVTFDAKVNSEEIDTQQNKIVTSDAIAPQEFSSLPEKPEIDSEQPKRSMKRFASEQLETEGTKFGYGSRKVSNPTFIAAQSKFEELSTMANSGRSSSLSNKDATVEAHGDPSSVGTDSAFRSKELLVENSAPFPLRIGGSECGTELSISSTLDSPDISEIGATENEPEVKDLSEGIRNPDNVINHEVEATVFCTTPACDLPSSALDQPETAKDKDINGKSVHSAVVVDPKEPALKSEKNISDLQKEQTESAVQDLRASPEASLRSHLTVPESHGTPSSQVSVKPKERKPEKSGSGSTNKRKLLSAGNKLPANATPDSGSRGSREQLPKDQGSGKRRNSFGSAKPDHIDQESRDNSNNSSLPRFMQATESARAKINANNSPRSSPDLHDREVNDKKRHSLPGASATGRQVSPRIHRSISQAQQGMKEQGLHPPHERKWQR 865
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele27g1996 865 Pfam IQ calmodulin-binding motif 217 234 IPR000048 GO:0005515
Lele27g1996 865 PANTHER IQ-DOMAIN 5-RELATED 1 831 - -
Lele27g1996 865 MobiDBLite consensus disorder prediction 344 366 - -
Lele27g1996 865 MobiDBLite consensus disorder prediction 829 851 - -
Lele27g1996 865 MobiDBLite consensus disorder prediction 518 542 - -
Lele27g1996 865 ProSiteProfiles IQ motif profile. 215 244 IPR000048 GO:0005515
Lele27g1996 865 MobiDBLite consensus disorder prediction 809 823 - -
Lele27g1996 865 Gene3D - 194 241 - -
Lele27g1996 865 MobiDBLite consensus disorder prediction 694 708 - -
Lele27g1996 865 MobiDBLite consensus disorder prediction 452 473 - -
Lele27g1996 865 MobiDBLite consensus disorder prediction 779 808 - -
Lele27g1996 865 MobiDBLite consensus disorder prediction 572 603 - -
Lele27g1996 865 MobiDBLite consensus disorder prediction 623 865 - -
Lele27g1996 865 MobiDBLite consensus disorder prediction 736 763 - -
Lele27g1996 865 Pfam Protein of unknown function (DUF4005) 770 847 IPR025064 -
Lele27g1996 865 MobiDBLite consensus disorder prediction 344 367 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele27g1996 Lele-ChrLele27 24189637 24195155 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele27g1996 180 865 IQD Protein Family AT1G19870 37.446 3.99e-105 336