Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele27g1995 ATGAGTAGTTTCGAATATAGACCCTGTAAGTCAATGGACGGTAATCAAGGTATCGATCCAGCCAGTGCTGGTACTGCTACTAGTATGCAACGAATCAATTCCGTACTTGTTTCCTCCTCGGGTGCTACTCCGAGGCCACAAAACCGATTCAATGCCCCCAGTCCCAATTTCAGTGCTTCTCAAATGGGCGGTTCTGCGTTTCTGATGCAACAAAACTTGAGTCCTGAGAATCTGAAACCTGGTATACCTCCATCCCACCCTAATATCCCAACTTCATCGCATTATCCCCAAATTTCAGAGTTCCAATCGGCTCCCCAGCAATTACGTTCTCCGATTATGAGACCGCGCTCTTCCCATTCACGGTCTTTGTCTCAACAGTCATTTTTTCCCCCGGATTGCTTGCCCCCATTGAGTCCTTCACTTTATTGTGAGCCCTCGGCGACCCCTCTTTCTAATTCGATTTCCACAGATGTGTCTATGGAAGAAAGAGTGGTTAACTCTCATGGCCCTGGCATTTCTATGCCCATAAATAGGGATCACGCCTTTCAGGCTGGTCCTAGTGTTCTTCCTCGTAAAGGACACAGGCGCTCCAGCAGTGATACTCCATTAGGAATCTCTGGCTTCATTCAATCTTCTCCTCTGTTGGTTCCCTCTCCTGCTTGGATGAATTTGGACAATTCAATTTCTAGAGGAGAAGGCTCGGGATTGGAGAAGCCAATTCAGGTGGTAAAAAAGGAGCCAAAAAAGGACGAGGGTCATGTTGATTGTCACAATGCAAAACCTATTATTGAGAGGAAAGAGGATGTGATGGATGATTTGATTAGCGTGTATATGAATCTGGACAACTTTGATAATATGAACTTATCTGGTGCGGAAGAATCAAAGACTTTTGAAAGCAGTGATAATGAAGTTGAGAGTCTCATAAGTGGAAAAACAACCTCTACACAAGGGGCAACTTCAAGCTTTGTGGAGGAAAGGAGGGAAGGAATCAAGAGGAGTTCTAATGGGGACATTGCACCAGGTTCCCGACATCGGAGAAGTTTTTCCTTGGATAGTTCTATAGGAAATTTGCATATTGGAGATGAATCACCGAAGCTTCCTCCTTTGGGCAATGGAGTTGGGCAGCGTTCTCCTAGCAATTCGGCAGATGGTAAAACATTTGAAATCGACATGGAGTTGAGAAATGGTGAATTCACTGAACTGGAGCTAAAAAAAATAATGGAAAGTGATAAGCTTGCTGAGATTGCTTTGTCAGATCCCAAGCGTGCAAGAAGAATATTGGCTAATCGTCAATCAGCTGCTCGATCCAAGGAGCGGAAGGTGCAGTACATTGCTGAACTGGAGCACAAGGTGCAAACTCTTCAGTCAGAGACAACCACAATGTCTACTCAATTTACTAAATTGCAGAGGGATAACTCACAGCTTAAAAGCGAGAACAGTGAATTGAAATTCAGGCTTCAAGCCATGGAACAACAGTCCCAACTGAAAGATGCTCTGAATGAGACCTTAACTGCTGAAGTCCAGCGTTTGAGGCTTACCGTCACGGAACTTGGTGGAGAGTCTATTCTCTCGGGTTGCATGGCTCGCCAACGTGCTATTAATCAACAAAGGTTCCAATTGCAACATGAGCAGCCTGGCCAACTTAAACGATCACAAATGCAAAATCAGTCTCAGGAGGAGACCCAGACTCAATCGCACTAG 1701 0.4503 MSSFEYRPCKSMDGNQGIDPASAGTATSMQRINSVLVSSSGATPRPQNRFNAPSPNFSASQMGGSAFLMQQNLSPENLKPGIPPSHPNIPTSSHYPQISEFQSAPQQLRSPIMRPRSSHSRSLSQQSFFPPDCLPPLSPSLYCEPSATPLSNSISTDVSMEERVVNSHGPGISMPINRDHAFQAGPSVLPRKGHRRSSSDTPLGISGFIQSSPLLVPSPAWMNLDNSISRGEGSGLEKPIQVVKKEPKKDEGHVDCHNAKPIIERKEDVMDDLISVYMNLDNFDNMNLSGAEESKTFESSDNEVESLISGKTTSTQGATSSFVEERREGIKRSSNGDIAPGSRHRRSFSLDSSIGNLHIGDESPKLPPLGNGVGQRSPSNSADGKTFEIDMELRNGEFTELELKKIMESDKLAEIALSDPKRARRILANRQSAARSKERKVQYIAELEHKVQTLQSETTTMSTQFTKLQRDNSQLKSENSELKFRLQAMEQQSQLKDALNETLTAEVQRLRLTVTELGGESILSGCMARQRAINQQRFQLQHEQPGQLKRSQMQNQSQEETQTQSH 566
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele27g1995 566 MobiDBLite consensus disorder prediction 1 62 - -
Lele27g1995 566 Coils Coil 472 492 - -
Lele27g1995 566 MobiDBLite consensus disorder prediction 361 384 - -
Lele27g1995 566 MobiDBLite consensus disorder prediction 294 347 - -
Lele27g1995 566 MobiDBLite consensus disorder prediction 18 62 - -
Lele27g1995 566 MobiDBLite consensus disorder prediction 294 322 - -
Lele27g1995 566 Gene3D - 418 481 - -
Lele27g1995 566 Coils Coil 437 457 - -
Lele27g1995 566 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 105 563 - -
Lele27g1995 566 SMART brlzneu 417 481 IPR004827 GO:0003700|GO:0006355
Lele27g1995 566 CDD bZIP_plant_RF2 422 472 IPR044759 GO:0003700|GO:0006355
Lele27g1995 566 Pfam bZIP transcription factor 421 479 IPR004827 GO:0003700|GO:0006355
Lele27g1995 566 MobiDBLite consensus disorder prediction 74 130 - -
Lele27g1995 566 MobiDBLite consensus disorder prediction 537 566 - -
Lele27g1995 566 SUPERFAMILY Leucine zipper domain 421 477 IPR046347 GO:0003700|GO:0006355
Lele27g1995 566 MobiDBLite consensus disorder prediction 91 130 - -
Lele27g1995 566 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 419 482 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele27g1995 Lele-ChrLele27 24181260 24184367 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele27g1995 29 516 bZIP Transcription Factor Family AT4G38900 44.487 2.05e-102 318
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Lele27g1995 bZIP_1 7.8e-11 CL0018
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g0089 25 531912 534991 Lele27g1995 27 24181260 24184367 hybridization
Lele26g0098 26 549821 552903 Lele27g1995 27 24181260 24184367 hybridization