Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele27g1993 ATGGATGGTGAAGTGAAGAGGTCTGGGACCAAGAAAAGATCGAAACAGGTTGAAATTGGTGTTGATTCGGATGATAATGAACCCATTGGGTCTCTATTTAAGCTGAGGAGGCCACGTAACTCCAAGAACGTTAATTTGACTTCAGAGGGCACTGGTGATAGATTTCAGAATGCGGAGGCTACCGGCAAGAAGTTGGTTGATGCAGAAGAGGATTCTGGGGGTATGGACGATACCTTAGCCAGTTTGCGGAAAAGATTGAAAGTTCCAAAGAGAGATCAGGGATCTGGAAGCACCAGAGGAAGAAATTCTGTTTTGAATGGGGCTGCTAGTAGTTCTTTGGAAAATGTGAAGGAAGGGCGGGTTTTGGGTAATAATGGATCTGATAATATAGCTGTAAAAGCAGTAGGCAGCAGTCAAGGAAACTTTGAGCGACTTCAAATGGATCTGAAGGGAAGTGAGGGTCACACTACATCCAATGATGATATGATTGCTTGTGGATCCAGGACTACATTGAAGGATGAGAAAGGGTTGGTTTTATTTCTTCAGGACTACATTGAAGAACAGAAGGAAGACTCATTGTCTTCAATTTTCCAAAATGCACAGTCTAATTTGAGTAGGAAATCTCGTGCACCATCAAGTTCAAAGCAGAAAACTGGGAGTCAGATGGTGGGCAATGGGTTGAACCATGTTCTTTTGAAAAGTATTCCAGAAACTGTAGAGTCTATGGTTGATTGCGGATCTAAATCTATTTCTGCCTTAAAATCAGGCAGTAGAATTTTGAAATCTGCCAATGATTTGCCTCAGGTATCACATTCACATTCATCTGCTTCAGCATCTGAAATGGATAATAAAAAGTTTGGTCATGCCTATCTTCAAGAGGAAATTTCCAAGGGCATTTTGCGTTCAAACATTCAAAATGGGGTGGCAGTTGGAGACAGCCAGAAAAAAGCTCAACTTGGTGATGGTTTGGAGTCTATGACTGATGTCCACAATGAAGACAGCCAGCAATCATCTTTTGTTCAACTTGGAGATGCTTGCTCTCCTTCCCACCAAAAGGTTACATTTCAAGAAAGAATTGGAAGTGATGGTTTGGAGCAGTGTTCTTTCAGGTTACATGGTCCTGAAGAAATAGTTGGCCCTGCCTCACTCTCAGAAGTGGGGGAAGGGCCATGTGGCGTTAGTGAGACTGAGTTCAAGAAAAGGTTAACGGATAAACTGGCAGTAATGTGTAATGATAGAAGAGAAAATGACGATTCTGTGGAGAAAGAAATTGCCTCACCTCCTCTAGTCTCCAATTCCATGAATAGATTATGTGGAAATTTACTGAATGAGAATGATCAGCCAGTTTCTGAAAAAGTTTCGGGGGGATCCTCTGGATTCCATGCCAAGGTAGATGGTGGTAGTCTGAATACAAAAGATGAACTGCAAGATCTTGTTTCAGGGTTTTCAGCAGAAAAAAATGCTGTAACTTCTGTTGGTAATTCACCTCCAATGATGTCTAATGAGGCTGGGGAAAATAAATTGGCTGACCAATCAAATTGCTCCCTAAAACCTTTAGAACCTTGTGTCATTCCAACTGATTCTACTGTGTCCATTCAGAAATGCAGCTCAGCATTACATCAAATTCAATCTTCTAATGATACATCTGAAGAAGGATCTCTTCCAAATGATTGTCATCTTCATGCCAAGAAAGGAGCTGACGGAACCTCACCACATGCAATTCTGAAAGAAAATGATAATTACACAGAATATGCGGTGTCTGGGTCTGAGTTTTCTAACAAACATGATAAGATATCAGCTGTTCAGCGTGCCATACGTAAGGCCAAAAAGCGCAGGCATGGAGATATGGCTTATGAGGGGGATGCAGACTGGGAAATTTTAACAAATGATCAATCTTTTCTTGAAAGCCAAGGAGTTGTAGGTGATGAACGGACTCTCAGACCAAGAATGAAGAATGGTTCCTCTATGAATGCTGATGAAGAGTCAGAAAGTGTCGCAGCAGCAGTATCAGCTGGTCTGAAAGCTCATGCAGTTGGTCCTGTTGAAAAGATAAGATTTAAGGAGATCTTGAAGCGTAAAGGTGGTCTCCAGGACTATTTGTTTTGTAGAAATCAGATCTTAAGTATTTGGAGCAGAGATGTCACTCGCATTTTGCCTCTTTCAGACTGTGGAGTCCCATCTGAGGATGAATCTCCCCTTTCTTCTCTTATTAGGGAAGTCTATGCATTTCTTGATCAATGTGGTTATATAAATGCAGGAATCGCCTCTCACAAGAATGCTGGAGCCAGTGCTGGGAATAGTTATAAACTTGTAAAAGAAAAGTGTTTTGAGGGCAGTTCCGCAGCTTCCATGGCTGACTCTGAAGATGGAGTTATCTTCATTGTAGGTCACACTAATAGGTCAGATACTTCCATGAAAATTGATGGTCTTAAAGTTGATTATGTAAACTCGGCACCTGAAGCTATAGAAGGCAATAGGTATGGTGATCAATTGATGTCGGATCTATCAAATATACTGCATCATGAAGAAGGAAAAATTAATGATTACCCAGAAAATGACGGGATTCAGGCAAGTGGGGTTGGGCTCATAAACATTAACAGTTCTGATCCTTCTTCCAACAATTCTGATTGCAAAGTGACGTCTATTGCAGCCACTGAGAAAAGCAATGAATCTACCTCCATTAAATATACCTTAGATGAACAGATACCTGATCCTTTGCAGTCTGATTCAGAGGTTGTGAAAAGAGTGATTGTCATTGGAGCTGGTCCTGCTGGATTAACTGCTGCTCGCCACTTGCAACGTCAGGGTTTTTCTGTAACTGTACTTGAGGCTAGGAATAGAATAGGAGGTCGTGTATTTACTGACCATTCATCTCTTTCCGTTCCTGTGGATCTTGGTGCTAGCATTATCACTGGAGTTGAGGCTGATGTGGCCACTGAGAGAAGACCAGATCCTTCATCTTTGATTTGTGCTCAGTTGGGCCTTGAGTTGACTGTGCTAAAAAGTGACTGTCCTCTTTATGACATAGTAACTGGACAGAAGGTTCCTGCAGACCTGGATGAAGCATTGGAAGCTGAATATAATAGTCTTCTAGATGACATGGTATTGCTTGTCGCCCAGAAGGGTGAACAAGCCATGAAAATGTCTCTAGAAGATGGTTTGGAATATGCTCTTACAAGGCGTCAAATGACACGCTTTGGTAGAAGTAGTGAAGAAGTTGAACAAAACAATTTTGCAGACATGTCTTTCAATGCCAAAAGAGGCAATGCACAGGAAAACATTAGCCATGTGGAAATTTTGAGTCCTCTAGAGCGGAGGGTTATGGATTGGCATTTTGCTCATTTAGAGTATGGCTGTGCAGCTCTTCTTAAGGAGGTTTCCCTTCCCTACTGGAATCAAGATGATGTTTATGGTGGATTTGGGGGGCCTCATTGTATGATTAAAGGGGGTTACAGCACTGTCGTTGAGTCTCTAGGAGAAGGGCTTATTATTTACTTGAACCATGCTGTAACAAATGTGTCATATGGTAAGGAGCCTGGCCGAAGTGATATAGTCAGAGTTTCTACATCAAATGGCAAGGAGTTTGTTGGTGATGCTGTCCTTATCACTGTTCCACTGGGCTGTTTGAAGGCTGAAACTATAAAATTCTCCCCACCTTTGCCTCAGTGGAAATGCTCTTCCATCCAGCGTCTTGGTTTTGGAGTTCTCAATAAAGTGATTTTGGAATTTCCTAGTGTGTTTTGGGATGATGCAGTGGACTACTTTGGAGCAACAGCAGAAGAAACAGGCAGAAGAGGTCACTGCTTTATGTTCTGGAATGTTAGGAAAACGGTTGGGGCTCCTGTCCTTATAGCATTAGTTGTTGGTAGGGCTGCAATAGATGGTCAATGTTTGAGCTCTGCTGATCATGTCAACCATGCATTAATGGTTCTCCGTAAGCTTTTCAGGGAGGATTCAGTACCTGATCCTGTTGCATATGTTGTGACTGATTGGGGGAGGGATCCTTTTAGCTATGGTGCTTACTCATATGTTTCTGTTGGAGCATCTGGAGAAGACTATGATATATTAGGGAGGCCAGTTGATAACTGCTTGTTTTTTGCTGGTGAAGCAACCTGCAAAGAGCATCCTGATACAGTTGGTGGTGCAATGATGAGCGGACTTCGGGAGGCTGTGCGTATAATTGACCTATTGAACACTGGTAATGATTATACTGCTGAAGTGGAGGCAATGGAGGCAGCACTGAGACAGTCTGATACTGAAAGGGATGAAGTTAGGGATATAATAAAAAGACTAGATGCAGTTGAGCTTTCTAATGCCTTGTACAAGAACTCTTTAGATGGTGCTCAAATCATTACTCGTGAAAGTTTACTAAGGGACATGTTCTTCAATGCTAAAACCAGTGCTGGTCGCTTGCATGTGGCCAAACAGTTGTTGAGTCTTACTGTTGATAACTTGAGATCCTTTGCTGGGAGTAAAGAGGGGCTCACTATTCTTAACTCATGGATACTGGACTCTATGGGGAAGGATGGGACCCAACTCTTGCGGCATTGTGTGCGTCTCCTTGTGCGGGTTTCAACTGATCTGCTTGCTGTGCGCTTGTCAGGCATAGGGAAAACAGTGAAGGAAAAAGTTTGTGTACATACTAGTCGTGATATACGTGCTATAGCAAGCCAGTTGGTCAGTGTATGGCTTGAAATCTTCCGCAAGGAAAAAGCTTCTAATGGTGGATTGAAGTTTTCAAGACATGCAACTACTGCAGATTTATCAAAGAGAAAATCTCTTAAAGATTCTACCTCAGGAAAGCCACCTCTGACTATGCATCATGGTGCTTCTGAGAATAAAGGAGGTTTGCTGGCTTCTGCATCTGCTGGAAGTAGTTCACCTTCGACTGCAAATGTGAAGAAATTGCACAGCAAACAAGTAAGACAACAGGAGGCAAATGACTCAAGGCATAGTGTCAATTCCTCCAGGTCCCAAGGTTCAGTAGGCAAAGCAGTTACTATGGAGGAGGGTAATTGTTGTGTTTTGTCCGAAGAAGAACAGGCTGCCATTGCTGCAGCAGAAGCTGCTCGTGCTAAAGCACTTGCTGCTGCCGAGGCTTATGCCTCAGCAGAAGCCAGGTGCAGTACACTGCTGCAGCTTCCAAAGATACCCTCATTCCATAAATTTGCTAGACGGGAGCATTATCCATCGAATGATGAATATGATAGTAAGAAAAAGTGGTCTTGGGGGGTTTTAGGAAGGCATGATTGTATTTCAGAGATAGATTCTAGGAATTGCAGAGTTAGGGACTGGTCGGTTGATTTTTCTGCTGCTTGTGTTGACCTTGACAATGCCAAAATGTCAGTAGATAACCTGTCACAGCGGAGTCATTCAAATGAGATTGCCAGCCATTTGAATTTCAGAGAGCATTCAGGAGAAAGTGTTGCTTTAGACAGCAGTTTATATACAAAAGCATGGATTGACACAACTAGTGGCGTGGGGATTAAAGACTATCATGCTATTGAGAGATGGCAATCTCAAGCAGCTGCAGCTGATTCTTATTTTTCTAACCCCACCATACATTTGAAGGATGAGGAAGAATCAAATGCCTGTTCAAGATTACCCAGCTGGAAGCATGACTGTATGGCAAATGAGAGCTCTGTTTCACAGGTTACTGTAAATAGGGAGGCCTCAAAATGTCATACTCGAGGGGCGGATCACGTTAAACAGGCTGTTGTTGATTATGTTGCATCACTACTTATGCCCCTTTATAAAGCGAGGAAACTAGATAAGGATGGGTACAAGGCTATAATGAAGAAAAGTGCAACTAAGGTGATGGAGCAAGCCACAGATGCCGAGAAGGCCATGGCTGTTCATGAATTTCTAGATTTTAAGCGAAAGAATAAGATCCGATCCTTTGTGGACAAATTGATTGAGAGGACTCGGTTTCGGTCTCGGTTTCGGTCTCGGTTTCCTTCATTTCTCACAGTTTTGATGGCCATAGACATGGCCTTGGATGAGCATTGA 6009 0.426 MDGEVKRSGTKKRSKQVEIGVDSDDNEPIGSLFKLRRPRNSKNVNLTSEGTGDRFQNAEATGKKLVDAEEDSGGMDDTLASLRKRLKVPKRDQGSGSTRGRNSVLNGAASSSLENVKEGRVLGNNGSDNIAVKAVGSSQGNFERLQMDLKGSEGHTTSNDDMIACGSRTTLKDEKGLVLFLQDYIEEQKEDSLSSIFQNAQSNLSRKSRAPSSSKQKTGSQMVGNGLNHVLLKSIPETVESMVDCGSKSISALKSGSRILKSANDLPQVSHSHSSASASEMDNKKFGHAYLQEEISKGILRSNIQNGVAVGDSQKKAQLGDGLESMTDVHNEDSQQSSFVQLGDACSPSHQKVTFQERIGSDGLEQCSFRLHGPEEIVGPASLSEVGEGPCGVSETEFKKRLTDKLAVMCNDRRENDDSVEKEIASPPLVSNSMNRLCGNLLNENDQPVSEKVSGGSSGFHAKVDGGSLNTKDELQDLVSGFSAEKNAVTSVGNSPPMMSNEAGENKLADQSNCSLKPLEPCVIPTDSTVSIQKCSSALHQIQSSNDTSEEGSLPNDCHLHAKKGADGTSPHAILKENDNYTEYAVSGSEFSNKHDKISAVQRAIRKAKKRRHGDMAYEGDADWEILTNDQSFLESQGVVGDERTLRPRMKNGSSMNADEESESVAAAVSAGLKAHAVGPVEKIRFKEILKRKGGLQDYLFCRNQILSIWSRDVTRILPLSDCGVPSEDESPLSSLIREVYAFLDQCGYINAGIASHKNAGASAGNSYKLVKEKCFEGSSAASMADSEDGVIFIVGHTNRSDTSMKIDGLKVDYVNSAPEAIEGNRYGDQLMSDLSNILHHEEGKINDYPENDGIQASGVGLININSSDPSSNNSDCKVTSIAATEKSNESTSIKYTLDEQIPDPLQSDSEVVKRVIVIGAGPAGLTAARHLQRQGFSVTVLEARNRIGGRVFTDHSSLSVPVDLGASIITGVEADVATERRPDPSSLICAQLGLELTVLKSDCPLYDIVTGQKVPADLDEALEAEYNSLLDDMVLLVAQKGEQAMKMSLEDGLEYALTRRQMTRFGRSSEEVEQNNFADMSFNAKRGNAQENISHVEILSPLERRVMDWHFAHLEYGCAALLKEVSLPYWNQDDVYGGFGGPHCMIKGGYSTVVESLGEGLIIYLNHAVTNVSYGKEPGRSDIVRVSTSNGKEFVGDAVLITVPLGCLKAETIKFSPPLPQWKCSSIQRLGFGVLNKVILEFPSVFWDDAVDYFGATAEETGRRGHCFMFWNVRKTVGAPVLIALVVGRAAIDGQCLSSADHVNHALMVLRKLFREDSVPDPVAYVVTDWGRDPFSYGAYSYVSVGASGEDYDILGRPVDNCLFFAGEATCKEHPDTVGGAMMSGLREAVRIIDLLNTGNDYTAEVEAMEAALRQSDTERDEVRDIIKRLDAVELSNALYKNSLDGAQIITRESLLRDMFFNAKTSAGRLHVAKQLLSLTVDNLRSFAGSKEGLTILNSWILDSMGKDGTQLLRHCVRLLVRVSTDLLAVRLSGIGKTVKEKVCVHTSRDIRAIASQLVSVWLEIFRKEKASNGGLKFSRHATTADLSKRKSLKDSTSGKPPLTMHHGASENKGGLLASASAGSSSPSTANVKKLHSKQVRQQEANDSRHSVNSSRSQGSVGKAVTMEEGNCCVLSEEEQAAIAAAEAARAKALAAAEAYASAEARCSTLLQLPKIPSFHKFARREHYPSNDEYDSKKKWSWGVLGRHDCISEIDSRNCRVRDWSVDFSAACVDLDNAKMSVDNLSQRSHSNEIASHLNFREHSGESVALDSSLYTKAWIDTTSGVGIKDYHAIERWQSQAAAADSYFSNPTIHLKDEEESNACSRLPSWKHDCMANESSVSQVTVNREASKCHTRGADHVKQAVVDYVASLLMPLYKARKLDKDGYKAIMKKSATKVMEQATDAEKAMAVHEFLDFKRKNKIRSFVDKLIERTRFRSRFRSRFPSFLTVLMAIDMALDEH 2002
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele27g1993 2002 MobiDBLite consensus disorder prediction 1588 1663 - -
Lele27g1993 2002 Pfam Flavin containing amine oxidoreductase 924 1394 IPR002937 GO:0016491
Lele27g1993 2002 MobiDBLite consensus disorder prediction 200 223 - -
Lele27g1993 2002 SUPERFAMILY FAD-linked reductases, C-terminal domain 1232 1343 - -
Lele27g1993 2002 SUPERFAMILY Homeodomain-like 663 756 IPR009057 -
Lele27g1993 2002 Pfam SWIRM domain 674 751 IPR007526 GO:0005515
Lele27g1993 2002 MobiDBLite consensus disorder prediction 1 128 - -
Lele27g1993 2002 MobiDBLite consensus disorder prediction 1 22 - -
Lele27g1993 2002 MobiDBLite consensus disorder prediction 1647 1663 - -
Lele27g1993 2002 MobiDBLite consensus disorder prediction 38 55 - -
Lele27g1993 2002 MobiDBLite consensus disorder prediction 95 113 - -
Lele27g1993 2002 ProSiteProfiles SWIRM domain profile. 664 761 IPR007526 GO:0005515
Lele27g1993 2002 SUPERFAMILY Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 1492 1576 IPR035441 -
Lele27g1993 2002 Gene3D - 1022 1349 - -
Lele27g1993 2002 PANTHER FLAVIN MONOAMINE OXIDASE 914 1401 - -
Lele27g1993 2002 MobiDBLite consensus disorder prediction 545 572 - -
Lele27g1993 2002 MobiDBLite consensus disorder prediction 1618 1637 - -
Lele27g1993 2002 MobiDBLite consensus disorder prediction 63 94 - -
Lele27g1993 2002 Gene3D - 663 763 IPR036388 -
Lele27g1993 2002 PRINTS Adrenodoxin reductase family signature 938 951 - -
Lele27g1993 2002 PRINTS Adrenodoxin reductase family signature 915 937 - -
Lele27g1993 2002 Gene3D - 916 1392 IPR036188 -
Lele27g1993 2002 SUPERFAMILY FAD/NAD(P)-binding domain 914 1397 IPR036188 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele27g1993 Lele-ChrLele27 24157492 24165829 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SWI/SNF-SWI3 Lele27g1993 Amino_oxidase 5.7e-105 CL0063
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g0091 25 547939 556220 Lele27g1993 27 24157492 24165829 hybridization
Lele26g0101 26 568439 576596 Lele27g1993 27 24157492 24165829 hybridization