Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele27g1978 ATGGACGTCGATCCCCGCCAATACGAAAACCTAGCAATAAATGATAATGACATCCAAAACATAGTTCTGTCGTATCTTATCCATAATTGCTACAAAGAATCAGTGGAGTCATTTATTGCTTGCACTGGAATGAAGCAACCTGCAGATTATTTAGAAGACATGGAAAAAAGAAAAAGAATTTTTCACTTTGCATTAGAAGGATATGCGCTCAAGGCCATTGAGCTGACTGAACAGCTGGCACAGGATATTCTTGAGAAGAATAAGGACTTACGGTTTGATCTTTTAAGCCTTCATTTTGTTGAGCTTGTCCGCTCTAGGAAATGCACAGAAGCTTTGGAGTTTGCTCAGAGCCAGTTGAGCCCTTTTGGGAAGGAGCAGAAATACATGGAAAAGCTTGAGGACTTTATGGCCCTTCTTGCTTATAAAGAGCCTGAGAAATCCCCAATGTTTCATCTGCTTAGCTTAGAGTACCGGCAGCAGGTTGCAGATAGTTTAAATCGAGCTATTCTTGAACACTCCAACCTTCCCAGCTACACAGCAATGGAGAGGCTTATACAGCAAGCTACGGTAGTTAGGCAGTGCTTAAGTCAAGAGGCTGGAAAGGATGGGCCTCCACCTTTTTCATTGAAAGATTTTCTCTAA 642 0.419 MDVDPRQYENLAINDNDIQNIVLSYLIHNCYKESVESFIACTGMKQPADYLEDMEKRKRIFHFALEGYALKAIELTEQLAQDILEKNKDLRFDLLSLHFVELVRSRKCTEALEFAQSQLSPFGKEQKYMEKLEDFMALLAYKEPEKSPMFHLLSLEYRQQVADSLNRAILEHSNLPSYTAMERLIQQATVVRQCLSQEAGKDGPPPFSLKDFL 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele27g1978 213 ProSiteProfiles C-terminal to LisH (CTLH) motif profile. 53 110 IPR006595 -
Lele27g1978 213 SMART ctlh 53 110 IPR006595 -
Lele27g1978 213 Pfam CTLH/CRA C-terminal to LisH motif domain 54 192 IPR024964 -
Lele27g1978 213 ProSiteProfiles LIS1 homology (LisH) motif profile. 14 46 IPR006594 GO:0005515
Lele27g1978 213 PANTHER RAN BINDING PROTEIN 9-RELATED 6 199 - -
Lele27g1978 213 SMART toby_final6 106 201 IPR013144 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele27g1978 Lele-ChrLele27 24040685 24043676 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g0103 25 668494 678510 Lele27g1978 27 24040685 24043676 hybridization
Lele26g0114 26 680350 684079 Lele27g1978 27 24040685 24043676 hybridization