Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele27g1974 ATGATGTACCCGAACCAAGCTTTTCCTTCTGGGTCCTACGCGGAGATGTTGTCTGGGAATTCTCTTTTAGCTCATAACTTCACAGAAACTGTAGGAAACCAAAATGAGGTGAAGTTCATGACAGCCGGTGACACTGTGGGCATGCAATCTATCGATGGGCATTCCAACACTGCAACAGGTGATCCATCTGTCAACTCCTTCACAAGGACGCAATTGGGGCTCGTTGATAGTGAACAACACAACATGCAGCGCCAGCGCTTATCTCTTAGCCTTGGCACACTCATGCCTGTCCCTCCCTTCCAATACCACTATCCCTCAGCCGGCTTTTCGTCTCTCATGACTCCAAGTCTTCCTAACTTTAAGGGCTCTGTTTCTCTTAAAGATGACGAGCCAAGTGCTGAGTGCATGGCACCTGTTTCTTCTGGAGGTTTTAACAGCTCCATCCAGAAGGAGGCTCTGTACAATCCACACTCCTCACTCTACCACAAGGAAGTTCACAATGATCCGTCGTATCTGCATGGGACACAAGGTTTCTCCAACGCTGCCTTAAACTCTCAATACCTTAAAGCAGCTCAGGAATTGCTTGATGAAATAGTTAATGTACGAAAGGCTTTAAAGCAACCTGGACTGGAAAAGAAAAAAGGTTCCCGTGACATTGGATTAGATGGCTGCAAAGAGTCCGAGGAAAAGTCTACCAGTCAGTCTATGCAGAACCAAGATCCTAATGCTTCATCTGCCAATGCGTCGTGTGAATTGTCACCCGCAGAACGGCAGAATTTGTTGGATAAGAAGGCAAAGCTTTTGTCCATGTTAGACGAGGTAGATAAAAGATACCGGCAGTACTGCCATCAGATGCAAATGGTGGTATCATCTTTTGATATGGTTGCTGGTTGTGGGGCTGCTGAACCATACACTACGCTTGCTTTGCGAACAATTTCTGGCCATTTTCGCTGTTTGCGTGATGCTATTAGTGGTCAAATTCAAGTGACTCAGAGGAGCCTTGGAGAACAAGAGGGGATTCCTCGTCTCCGCTATGTTGATCAGCAGCTAAGGCAACAAAAGGCCCTTCAGCAGCTTGGCGTGATGCGACAAGCTTGGAGGCCCCAGAGGGGACTTCCTGAAAGTTCTGTTTCAATACTCCGTGCTTGGCTCTTTGAGCATTTCCTTCATCCTTACCCAAAGGATTCGGAGAAAATTATGCTGGCAAGGCAAACAGGCCTGACCAGGAACCAGGTGGCAAACTGGTTCATCAATGCAAGGGTGCGTCTTTGGAAGCCAATGGTTGAGGAAATGTACAAAGAAGAGTTTGGTGATTCTGAGATGGCAAGCTGCAATCTCTCATCTGAAAGTACTCCCCAAGCTCCAAGAGTTAATAAAGGGGAAGAGTCGCAGGATAATGTGAAAGCTGCTAATAATATCCAACATGGGCAGCTTCATGAGCTGAAGCTAGACCATAGCTCCGCCACAGAATTTGATACTGCCCATGGAGAAGCTGTCATGCATTCTGGAATCATGAAATTGCAGGGTGATGGAAGGCCTAATATGAACAATACCCTTTATTCCAGCGGACCTATACCAACCAACCACAATGGTGATGGCTGCCTGATGCCTTCTGATCCAGCGGCCTCATACGATTTATCAGGGTTGGGTGGTTTTCCAGTGGGTGGCCACGTGTCTCTTGCGTTGGAGTTGCGCAACTGTGAAACTGGGGAATTCGCCACATCTGATAATGGTTTCAACACACAACGTAACCAGACGTTAGATTCTTCCCCAGAAAATAATTTGATTGATTATCATTTCACAGATTCAGGAAAGCAACAAAACAGGTTCAGTAATCCTCATCTACTGCATGAGTTTGTCGTCTAA 1866 0.4657 MMYPNQAFPSGSYAEMLSGNSLLAHNFTETVGNQNEVKFMTAGDTVGMQSIDGHSNTATGDPSVNSFTRTQLGLVDSEQHNMQRQRLSLSLGTLMPVPPFQYHYPSAGFSSLMTPSLPNFKGSVSLKDDEPSAECMAPVSSGGFNSSIQKEALYNPHSSLYHKEVHNDPSYLHGTQGFSNAALNSQYLKAAQELLDEIVNVRKALKQPGLEKKKGSRDIGLDGCKESEEKSTSQSMQNQDPNASSANASCELSPAERQNLLDKKAKLLSMLDEVDKRYRQYCHQMQMVVSSFDMVAGCGAAEPYTTLALRTISGHFRCLRDAISGQIQVTQRSLGEQEGIPRLRYVDQQLRQQKALQQLGVMRQAWRPQRGLPESSVSILRAWLFEHFLHPYPKDSEKIMLARQTGLTRNQVANWFINARVRLWKPMVEEMYKEEFGDSEMASCNLSSESTPQAPRVNKGEESQDNVKAANNIQHGQLHELKLDHSSATEFDTAHGEAVMHSGIMKLQGDGRPNMNNTLYSSGPIPTNHNGDGCLMPSDPAASYDLSGLGGFPVGGHVSLALELRNCETGEFATSDNGFNTQRNQTLDSSPENNLIDYHFTDSGKQQNRFSNPHLLHEFVV 621
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele27g1974 621 MobiDBLite consensus disorder prediction 230 252 - -
Lele27g1974 621 MobiDBLite consensus disorder prediction 443 465 - -
Lele27g1974 621 ProSiteProfiles 'Homeobox' domain profile. 363 426 IPR001356 GO:0003677
Lele27g1974 621 CDD homeodomain 366 427 IPR001356 GO:0003677
Lele27g1974 621 SUPERFAMILY Homeodomain-like 367 434 IPR009057 -
Lele27g1974 621 SMART prehox3 176 325 IPR006563 -
Lele27g1974 621 Pfam Associated with HOX 183 324 IPR006563 -
Lele27g1974 621 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 90 452 - -
Lele27g1974 621 MobiDBLite consensus disorder prediction 209 229 - -
Lele27g1974 621 Coils Coil 257 277 - -
Lele27g1974 621 Pfam Homeobox KN domain 383 422 IPR008422 GO:0003677|GO:0006355
Lele27g1974 621 SMART HOX_1 366 430 IPR001356 GO:0003677
Lele27g1974 621 Gene3D - 363 440 - -
Lele27g1974 621 MobiDBLite consensus disorder prediction 209 252 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele27g1974 Lele-ChrLele27 24012317 24014487 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele27g1974 27 449 Homeobox Transcription Factor Family AT1G19700 48.864 3.06e-114 350
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Lele27g1974 POX 1.3e-49 No_clan