Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele27g1972 ATGCAAACTCTCGCAGTGACCCTATCGTATCTATTATATGATATTATGTGTTGCTTCTTTGGGCAAAGTGTCAGGCTGGACAACACCTTCCACCATTTAGTCTGCATTGCTGCAATCATGGCTGTTTTCTACAATCAAAAGGTCATTTCCTTCACTGTCAAATTCTGTCTCTGTTTCTTTAAAATCGGAATTTCTTTGTTCAACCATGGCGATGGATACAATTCTGCAGTGCGGCTCAGAGATGGTGGTGGTACTTATCTCACATAAGAGTCAATAGATGTTCCAGGACATGATCCTTGCGCATCAAATTTTATAGGTAATTGGATATGGTTGAGGAAAAAGCCGCAACAGAACGTTGTAAAGACGGTTGGTTTAGGAGTGATTTCATGGACGATAGCATTTGTGGTAGTGAGAAGGGTGTTTGGCAAGTACTCGTTCGACTTCAGCAACCGCCTTGTGTCTACGGTGCATGCAACATTAGCGGTAACATTAGCTTCACTCTCTGTTCGAGATTGGAAATGTCCGCTGTGTCCCATGGCCTCAACGTCTTCGCCTGCGCAGATTCAAACTCTGGCAGTGAGCCTTTCGTATCTCATATATGATTTAGTTTGCTGCTTGTTTGGGGAAAGAATCAGTCTGGACAACGCCACCCACCATTTGGTCAGCATTGTTGGACTTACTGCTGGTCTCTACTATCAAAAGTGTGGCTCGGAGATGGTGGGAGCTCTTTGGGTAACGGAAATGTCGAGCCCTTTTCTGCATTTGAGGGAGCTTTTGAAGGAGATGGGTTACAGGGATACTGCCCTTAATTTGGCTGCTGACATTTTGTTTGCTGCCATATTTACAGTTGCAAGGATGGTTGCGGGTCCTTATATAACTTACGTAACTCTATCTGCCGAAAATCCGCCAATGATAAAGGCCATGGGATTGGGTTTGCAGCTGGTAAGCTCCTTCTGGTTCTTGAAGATTGTAAGAATGATGAAATACAAGTTAAAGAAGAGGACCACAACAAAGCATGGCATCAAGCACGCCAGCAAAATGGACCTGAAATCAAAGTCCCAGTATTGGACTTGGTTTGACCTGGTTCGTAGTTGTCTTTTATTTGTTTCTGGAGAAAAGTTTGTAGTTGTGTTTTGGGATGGGAGAAAGTCAATAGATGTTCCAGGACATGATACTTGCGCATCAAATTTTATAGTGGGGATTGAAATGGAAGAGAACGTTGTAAAGACGGTTGGTTTAGGAGTGATTTCATGGACGACAGCATTTGTGATAGCGAGAAGGGTGTTTGACAAGTACCCGTTCGACTTCAGCAACCGCCTTGTGTCTACGGTGCATTCAATATTAGCGGTAACATTAGCTTCACTCTCTGTTCGAGATTGGAATTGTCCGCTGTGTCCCATGGCCTCAACGTCTTCGCCTGCGCAGATTCAAACTCTGGCAGTGAGCCTTTCCTATATGATATATGATTTAGTTTGCTGCTTGTTTGGGGAAAGAGTCGCTCTGGACAATACCATCCACCATTTGGTCTGCATCGTTGGGGCTACCGCTGGTCTCTACCATCAAAAGTGTGGCTCGGAGATGGTGGGAGCTATCTGGGTAGGGGAAATGTCGAGCCCTTTTCTGCATTTGAGGGAGCTTTTGAAGGAGATGGGTTACAGGGATACCGCCCTTAATTTGGCTGCTGACGTAAGTATACTGTCTAATTATGGGGTCTATTTTGTTTGCTGCCATATTTACAGTTGCAAGGATGGTGGTGGGTCCGTATATCACTTACGTAACTCTATCAGCCGAAAACCCGCCAATGATAAAGGCCATGGGATTGGGTTTGCAGCTGGTGAGCGCCTTCTGGTTCATGAAGATCGTAAGAATGATGAAATACAAGTTACTGAAGAGGACCACAACAAAGCACGCCAGCAAACTGGAGTGAGACGACAAGTTATGGATTTCTGCATTGACGGCGGCCATTTATTCGTATGTATTAATAGCCTGTAG 1992 0.4473 MQTLAVTLSYLLYDIMCCFFGQSVRLDNTFHHLVCIAAIMAVFYNQKVISFTVKFCLCFFKIGISLFNHGDGYNSAVRLRDGGGTYLTXESIDVPGHDPCASNFIGNWIWLRKKPQQNVVKTVGLGVISWTIAFVVVRRVFGKYSFDFSNRLVSTVHATLAVTLASLSVRDWKCPLCPMASTSSPAQIQTLAVSLSYLIYDLVCCLFGERISLDNATHHLVSIVGLTAGLYYQKCGSEMVGALWVTEMSSPFLHLRELLKEMGYRDTALNLAADILFAAIFTVARMVAGPYITYVTLSAENPPMIKAMGLGLQLVSSFWFLKIVRMMKYKLKKRTTTKHGIKHASKMDLKSKSQYWTWFDLVRSCLLFVSGEKFVVVFWDGRKSIDVPGHDTCASNFIVGIEMEENVVKTVGLGVISWTTAFVIARRVFDKYPFDFSNRLVSTVHSILAVTLASLSVRDWNCPLCPMASTSSPAQIQTLAVSLSYMIYDLVCCLFGERVALDNTIHHLVCIVGATAGLYHQKCGSEMVGAIWVGEMSSPFLHLRELLKEMGYRDTALNLAADVSILSNYGVYFVCCHIYSCKDGGGSVYHLRNSISRKPANDKGHGIGFAAGERLLVHEDRKNDEIQVTEEDHNKARQQTGVRRQVMDFCIDGGHLFVCINSL 663
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele27g1972 663 ProSiteProfiles TLC domain profile. 143 332 IPR006634 GO:0016020
Lele27g1972 663 SMART lag1_27 143 332 IPR006634 GO:0016020
Lele27g1972 663 SMART lag1_27 431 621 IPR006634 GO:0016020
Lele27g1972 663 Coils Coil 619 639 - -
Lele27g1972 663 Pfam TLC domain 147 325 IPR006634 GO:0016020
Lele27g1972 663 Pfam TLC domain 435 577 IPR006634 GO:0016020
Lele27g1972 663 ProSiteProfiles TLC domain profile. 431 663 IPR006634 GO:0016020
Lele27g1972 663 PANTHER TRANSMEMBRANE PROTEIN 136 1 48 IPR042512 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele27g1972 Lele-ChrLele27 24000998 24006833 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g0112 25 715152 716298 Lele27g1972 27 24000998 24006833 hybridization
Lele26g0123 26 723489 724082 Lele27g1972 27 24000998 24006833 hybridization