Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele27g1970 ATGTATTTTGAAATTGAAGGGAATTTACCGTCCTTGAAGCTTAAAGTTCTGATTTTTTGTGTAAAGGGAATGGCGACTCCTGTTGAGCCTCCAAATGGGATCAGAAGTGAAGGAAAGCATTATTACTCCATGTGGCAAACCCTGTTTGAGATTGATACAAAATATGTGCCCATCAAGCCTATTGGTCGAGGAGCGTATGGAATTGTGTGCTCTTCAGTCAACCGAGAAACCAATGAAAAAGTTGCCATTAAGAAGATACAGAATGCTTTTGAAAACCGGGTTGATGCACTAAGAACTTTGCGTGAGTTGAAACTTCTTCGGCATCTCCAACATGAAAATGTGATTGCTTTGAAAGATATCATGATGCGTAATCATAGAAAAAGTTTCAAGGACGTCTACCTGGTATATGAACTTATGGACACAGATTTGCATCAGATTATTAAGTCTTCGCAAGCACTGTCTAATGATCACTGCCAATATTTCCTCTTTCAGTTGCTTCGGGGCTTGAAGTATCTTCATTCAGCTAACATCCTTCATCGTGACTTGAAGCCTGGGAATCTTCTAATCAATGCAAACTGTGACCTAAAAATATGTGATTTTGGGTTAGCACGCACCGGTAGCACCAAGAACCAGTTTATGACAGAATATGTTGTCACTCGGTGGTATCGAGCACCAGAACTTCTGCTTTGCTGTGACAATTATGGGACATCTATTGATGTCTGGTCCGTGGGATGCATCTTTGCAGAGCTTCTTGGACGAAAACCTATTTTCCCTGGTTCAGAGTGTCTGAATCAGCTAAAACTAATTATCAACATACTTGGCAGCCAAAGGGAGGAGGATCTTGAATTCATTGATAATCCTAAGGCAAAGAGGTACATCAAATCACTTCCATATTCTCCAGGAACGCCATTTTACCGGCTTTACCCAAATGCCCATCCATTGGCAATTGATCTACTGCAGAAGATGCTTGTTTTTGACCCATCAAAGAGGATTAGTGTTACTGAAGCACTTCAACACCCTTATATGTCCGCTCTATATAATCCTAACAGCGACCCTCCAGCTATTGTTCCTATTGATCTGGACATGGAGGAAGATTTGGGAGAAGAGATGATAAGGGAGATGATGTGGAAGGAAATGCTTCATTACCATCCTGAAGCTGCTACGGCAAATACAGTGGTGTGCTCATGA 1188 0.4141 MYFEIEGNLPSLKLKVLIFCVKGMATPVEPPNGIRSEGKHYYSMWQTLFEIDTKYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKIQNAFENRVDALRTLRELKLLRHLQHENVIALKDIMMRNHRKSFKDVYLVYELMDTDLHQIIKSSQALSNDHCQYFLFQLLRGLKYLHSANILHRDLKPGNLLINANCDLKICDFGLARTGSTKNQFMTEYVVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAELLGRKPIFPGSECLNQLKLIINILGSQREEDLEFIDNPKAKRYIKSLPYSPGTPFYRLYPNAHPLAIDLLQKMLVFDPSKRISVTEALQHPYMSALYNPNSDPPAIVPIDLDMEEDLGEEMIREMMWKEMLHYHPEAATANTVVCS 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele27g1970 395 ProSitePatterns Serine/Threonine protein kinases active-site signature. 177 189 IPR008271 GO:0004672|GO:0006468
Lele27g1970 395 SUPERFAMILY Protein kinase-like (PK-like) 47 348 IPR011009 -
Lele27g1970 395 Pfam Protein kinase domain 56 342 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele27g1970 395 SMART serkin_6 55 342 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele27g1970 395 FunFam Mitogen-activated protein kinase 139 368 - -
Lele27g1970 395 FunFam Mitogen-activated protein kinase 41 149 - -
Lele27g1970 395 Gene3D Transferase(Phosphotransferase) domain 1 139 368 - -
Lele27g1970 395 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 54 354 - -
Lele27g1970 395 ProSiteProfiles Protein kinase domain profile. 55 342 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele27g1970 395 Gene3D Phosphorylase Kinase; domain 1 42 378 - -
Lele27g1970 395 ProSitePatterns MAP kinase signature. 90 193 IPR003527 GO:0004707|GO:0005524|GO:0006468
Lele27g1970 395 CDD STKc_TEY_MAPK 49 384 - -
Lele27g1970 395 ProSitePatterns Protein kinases ATP-binding region signature. 61 85 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele27g1970 Lele-ChrLele27 23991037 23993168 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele27g1970 24 391 MAP Kinase Gene Family AT1G10210 86.685 0.0 681
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Lele27g1970 Pkinase 2.2e-72 CL0016