Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele27g1968 ATGCTTCCACACTTTTCTATACAAACACATGCAGGAATTCAAAAACAAACATGTCTTGAATGCCTTATATCGACCTATATTCCACTAACGTTCCACGTCAGTGATACGAGTGGAGCAGATGGTTTTATAATCAAAATGAGGGATGGTAGACATTTAAGGTGCATCCATAACAACCCTCAGGGAGGACATTTGCCAGATTACGCACCACATCCTGCAATTGTACTGAAGATGGAAGATGGAGCCGGTCTACTTCTCCCCATAATAGTTTCGGAGATGCCCAGCGTTTTGCTAATGGCAGCAGTACGCAATGTTCAAATGGCTAGACCTACTTTGTATCAAGTAGTAAAGGAGATGGTTGACAAGATGGGCTATGAAGTCAGACTTGTTGGGAATGAGAATGAAGGTATTAGCTTTGATCTTCGACCTTCAGATGCTATCAACATAGCTGCAAGATGCAAGGTGCCAATACAAGTTAACAAGTACTTGGCTTATAGTGACGGAATGAGAGTAATTGATTCTGGCAAGTTATTAGCACAGTCCCCTGGTTCAGACGGTCTATTATTTGCTGAACTGGACCGGCCAAGTGGTCAGCCTTGTACTGAAACCCAGGAGTTCAATCTCTTACACAACATGTTGAAAGCTGTTGTCGAAGAGCGCTATAAAGATGCTGGGACAAGCTCCGTCAACATAGGGCTGGCAAAAACGCGAATAACAGATCCTGGACACCTTAAGATTCAGCAGATAGCAGTCATGGTTCACCCTGTCATGCACCCCTTTACAGAGATATATCCAAAGACATTACGAGAAGTTGTCGAGCGTCGCGGCGAGCAGCTTGTCGTGGATTCAAAACTCAACTTCGAAAGCAGAGCAGGTAGAAGTATTGAATTGAAGTCAAAGAAGAACGTCTCATTATGGTTTCCTGCTTCTTTTAGCCAACCACTGCCATCTTCGTTTATAATATTGACAAGTCCGGACCGCTTGATCGGTTCGCCCGGCCTTGCTTTGAAAGATTCTCTGGTCATGATGATCGAAAAGGGAGGAAATCAGATTTCGAGAATTCAGAGGATGATAGGCGGACGAGACTCGAAAGACGTCCGAGACGCTGTGGAGCTTCAAGCAGTGGACTCATTTCGACGGGCACTTTTGTCAGATAACTTGTTGCCTCCCAGACATGATGACGACCATATGTTGTTGAGGTTACCATTCTTTGTCATTACGATATTCATTTTGTACACCCATAATATGGACACTTAA 1254 0.4402 MLPHFSIQTHAGIQKQTCLECLISTYIPLTFHVSDTSGADGFIIKMRDGRHLRCIHNNPQGGHLPDYAPHPAIVLKMEDGAGLLLPIIVSEMPSVLLMAAVRNVQMARPTLYQVVKEMVDKMGYEVRLVGNENEGISFDLRPSDAINIAARCKVPIQVNKYLAYSDGMRVIDSGKLLAQSPGSDGLLFAELDRPSGQPCTETQEFNLLHNMLKAVVEERYKDAGTSSVNIGLAKTRITDPGHLKIQQIAVMVHPVMHPFTEIYPKTLREVVERRGEQLVVDSKLNFESRAGRSIELKSKKNVSLWFPASFSQPLPSSFIILTSPDRLIGSPGLALKDSLVMMIEKGGNQISRIQRMIGGRDSKDVRDAVELQAVDSFRRALLSDNLLPPRHDDDHMLLRLPFFVITIFILYTHNMDT 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele27g1968 417 SUPERFAMILY Hypothetical protein TM0160 54 173 IPR036104 GO:0004518
Lele27g1968 417 ProSiteProfiles Bifunctional nuclease (BFN) domain profile. 54 170 IPR003729 GO:0004518
Lele27g1968 417 PANTHER VON HIPPEL-LINDAU PROTEIN 36 224 - -
Lele27g1968 417 Gene3D Bifunctional nuclease domain 129 174 IPR036104 GO:0004518
Lele27g1968 417 Gene3D Bifunctional nuclease domain 60 128 IPR036104 GO:0004518
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele27g1968 Lele-ChrLele27 23974569 23981811 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g0116 25 734282 736565 Lele27g1968 27 23974569 23981811 hybridization
Lele26g0127 26 741652 743774 Lele27g1968 27 23974569 23981811 hybridization