Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele27g1950 ATGGCGTCAAAAAGCTCGAGTAATTGGACGAAGAACCAGAACAAAATGTTCGAGAATGCTTTGGCAATGTACGAGGAAGACAGCCCAGATCGATGGCAGAAGCTGGCAAGGGCGGTGGGAGGGAAGACAGAGGGAGAAGTGAAGAGGCGTTATGAGAAGCTTGTGGATGACCTCAAACAGATTGAGGAAGGTCGAGTGCCCTTGCCCAATTACATTAGTACCCTTCAATTGCGTGGGATGAACACCGAAGTTGAATTAAGTCCATTGACTAAGCTTGCAATGGAAGCTGACGCTTCGTCATGTAAGATTATATTGGGCTCATCCTCTATTGCCCGCCGGAAGATATTAGCTGAAATGGGTTACCATTTCACGACAATGACCGCAGATATTGATGAGAAAAGCATCCGAAAGGAAACTCCAGAAGAGTTGGTCATGGCTCTAGCTGAAGCCAAGGCTGATGCCATCATCTCAAAACTCCAAACAACCAATAGTCAAGAGGCTGTTGATGAATCAACAATTTTAATCGCAGCGGACACAGCAGAAGCTATTTTAAAGAGGCTTCCCGTTGATGACCACATAAAGGAAGCTGAGCCAACATTATTAATTACTTCTGATCAAGTGGTGGTCTATGAAGGCGTGATTAGGGAAAAGCCATCTAACAAAGAAGAAGCTCGACAATTCTTGAAAGATTATTCCGGAAAGCATGCAGCAACTGTAGGGTCTGTGCTAGTTACAAACCTCAAAACAGGGTTCAGAAAAGGAGGATGGGATCGTGTGGAGATCTATTTCAATGAAATACCTGATGAGATCATTGAGAAGCTGATTGACGAGGGAGTTACACTCATCGTTGCTGGGGGTCTCATAATTGAGCATCCTTTAATGTTGCCATTAGTCAAAGAAGTGGTAGGGACAACTGATAGTGTGATGGGGCTTCCTAAAGCTCTGACTGAAAATCTCTTAAAGCAGAACTCTAGTATTCTGCCGGAATGTAGTGGCAGGCCTGTTTCTGGCAAGATGGCCGGTTTGGTGACGTATTGA 1038 0.448 MASKSSSNWTKNQNKMFENALAMYEEDSPDRWQKLARAVGGKTEGEVKRRYEKLVDDLKQIEEGRVPLPNYISTLQLRGMNTEVELSPLTKLAMEADASSCKIILGSSSIARRKILAEMGYHFTTMTADIDEKSIRKETPEELVMALAEAKADAIISKLQTTNSQEAVDESTILIAADTAEAILKRLPVDDHIKEAEPTLLITSDQVVVYEGVIREKPSNKEEARQFLKDYSGKHAATVGSVLVTNLKTGFRKGGWDRVEIYFNEIPDEIIEKLIDEGVTLIVAGGLIIEHPLMLPLVKEVVGTTDSVMGLPKALTENLLKQNSSILPECSGRPVSGKMAGLVTY 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele27g1950 345 SUPERFAMILY Homeodomain-like 7 62 IPR009057 -
Lele27g1950 345 PANTHER BIFUNCTIONAL DTTP/UTP PYROPHOSPHATASE/METHYLTRANSFERASE PROTEIN-RELATED 99 179 IPR003697 GO:0047429
Lele27g1950 345 FunFam Maf-like protein, expressed 179 323 - -
Lele27g1950 345 Hamap dTTP/UTP pyrophosphatase. 102 325 IPR003697 GO:0047429
Lele27g1950 345 Pfam Maf-like protein 102 322 IPR003697 GO:0047429
Lele27g1950 345 ProSiteProfiles Myb-like domain profile. 1 55 IPR001005 -
Lele27g1950 345 SUPERFAMILY ITPase-like 101 321 IPR029001 -
Lele27g1950 345 Gene3D - 1 68 - -
Lele27g1950 345 CDD SANT 8 55 IPR001005 -
Lele27g1950 345 SMART sant 5 57 IPR001005 -
Lele27g1950 345 Gene3D - 94 181 IPR029001 -
Lele27g1950 345 Gene3D - 182 323 IPR029001 -
Lele27g1950 345 FunFam Transcription factor SRM1 1 68 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele27g1950 Lele-ChrLele27 23890820 23896138 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g0135 25 830922 834610 Lele27g1950 27 23890820 23896138 hybridization
Lele26g0149 26 838155 840761 Lele27g1950 27 23890820 23896138 hybridization