Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele27g1949 ATGGATGTATGGCATAGACTCAGGCCACCTCTATGCTGGTTGGTCATGAACTTGAAGCATGGAAATGATAATGGCCTCGTTGAACCAGTTATCCGGGGTATTCGTGCTACAACTCTAGCAATCGAGGAGGCTAGAGAACAACACCAGGGTCTCTCATCAGAGACTCAAAGGGTACTTGGCTTGCTTGCAAGTAACTCCTTCCTTCTAACTCTGAGAGAAACAGCGCCGCTCTGCAAGCCGGCAAGAAGCAAAAGCCAGAGTCACCGTAACTACGCCACAACTTTCAAAGAGCTTGAAGAGAGTTTACAAGAGGCAGCAGAGCATCATCAATGCAGAATCAGAGCTAGTGATTGGGGTTATAAATGGATACAGACGTTAACTTCACCAGCAGGTCAAGTTGCTGAGGAGGTAGAAGATGAAACTCCCCTGAGCAACGAGGAGATAATTAAACGAAGCGTCAGTTTCTCAAACATAACCATGGAATTACGGAGAGTATTACTGAAGACAGCTTTAGTCTTGTTCTTTATTCAGTTTGGTCTAGCTAGAGACATATCTTCGAGCTTCGGAATAGAAAGGCTCGCGCTGCGTCAGCTTCGCTCGTCGTTGGGGATTCGTAGCAAGTACTGGCCCATAAAAGCGGAACCGTGCAGGAACTGGACCCGGGTTCGGTGCCAGAACGGGCGAGTCGTTGGGATCAACTTATCTGGTTTAAGACGAACCCGAGTCGGCCGTCTCCATCCCCGTTTGGCAGTGGATTCTCTTGTCAATTTCACACTCTTGGAGTCATTCGAAGCTTCTGGGTTCTTGCTGAATGGGTCTATTCCTGACTGGTTCGGACAGCGCCTGGGGACACTCCGAAGGCTCGATCTAAGTTCTTGCTCACTCACGGGTCTCATTCCTCCATCGCTTGGGAATTTGAGCAGGCTGAAGTTTCTGATTCTGGCAGATAATACTCTCACTGGGAGAATGTCTTCCACATTGGGACAATTATCCAGTTTATCGGTTCTGAATCTCTCAGGAAATTCGCTCACTGGATTAATGCCCAGCTCTTTCTCGTCTCTGGTCAATCTCACCAGCCTTGACCTTTCATCTAATTTTTTATCTGGTTCGATTCCATCCTATCTTGGTAACCTCAATAGGCTTCAGTTTTTGAATCTTTCCGACAATGGCTTCACCGCCCCAATACCTTACCAAATGAGCAATCTTTCTCAGTTAGTTCAGCTTGATCTAAGCAAGAATTCTTTGTCTGGGCCATTGCCAGGTGATTTGTTTTCTAGTCTTATTTTCCTACGAAGTCTATCTCTGAGTAGGAATGCTTTTGACGGCGTTCTTCCTCCTGCATTGTGGTCAATGAGCCACCTGTCCGTCCTTGATGTATCCAGCAACACCCTTACTGGCACCCTTCCGAAACTTGGCCCAAATATTAATTCTACAGTTGCTATCTTCAACCTCTCAAACAATTTATTCTATGGATATCTTAATACTTCGTTTAAGAAATTTAGGATCATTGATTTGTCCGGTAATTATTTCCAAGGCAACGTGCCTGATCATGGCTTAAGTAATATTGCCCTTGATACAAATTGCCTAATAATGAGTCCGAAACAAAGGAGTTCCGGAGATTGTAGGCTGTTCTATGCTCAGAGAAGCCTAATCTTTGTTGGTGCTCAAGAACCAGCCCCGTCGCCTTCGGCCGAAGCAGAGTCCAGAAACAACAAACGAGTGTTATTCATTTTGGCAGGCACATTTGGTGGGCTTGTGTTTATTGTGATTCTAGCATTGGTCCTAGCACTGCTTCTACGAAAATGTGGTAGTAGCACTGAAACTCAAAAAAGGGAAGCAAACGAGGGAGCCGTTCAAGAAGGGGAAAGTCCTATGCCTCCTAAGAATCCTATGTTAGACAGTGGCATGGGAGAATCATTTAGTTATGAGCAAGTGCTCCATTTGACTGGTAATTTTGCTGAAGTTAATATCATCAAGCATGGTCATTCCGGCGACCTTTTCAGGGGAATCCTGGAAGGTGAAGTAAGTGTGGTTGTGAAAAGGGTAGATTTGAACTTAGTCAATAAAGAATCATTCATGTTGGAATTGGAACTGCTAAGCAAGGCTTCACATACAAAATTGGTGCCGCTACTGGGGCACTGCTTGGAGAATGAGAATGAGAAATTTTTAGTTTACAAGTACATGCCAAATAGAGATTTGGCTACTTGCTTGCACAGAGTAAGTGGCTCAGACGATAAAGAACAATCGCTAGATTGGATTACCAGATTGAAAATTGCAATAGAAGCTGCTGAAGGCCTATGTTACCTGCATGATTGCAGCCCTCCCCTTGTCCATAGAGATGTCCAAGCAAGCAGTATACTTCTTGATGATAAATTTGAAGTTAGACTTGGAAGTTTGAGCGAAGTTACTTCCCAAGGAGATCTTAACCCGAGTGTCATCACAAGGTTATTTCGCAAGTTACAATCTTTTGATCAAAACAATCCTGGTTCATCATCTGCAACATGGGATTATGATGTATACTGTTTTGGGAAGGTCTTACTTGAGCTTGTTACCGGTAAGCTTGGCATTAGCAAGACAGAAGATGCCGGCACAAGAGAGTGGATAGAGCAAACGTTGTCATACATAAGCATAAATGACAAGGAACAGGTGAATAAAATAGTAGACCCATCTCTGATAGTGGATGAGGACTTATTGGAAGAGGTGTGGGCTATGGCAATTGTGGCCAGATCATGCCTCAACCCTAAGCCTTTTAAACGCCCTCCAATGGGGCATGTCCTAAAAGCACTGGAAAATCCATTGAAGATAGTGAGAGAAGAATATAACAGTAGCTCAGCATTGAGAACAACTTCATCAAGGAGATCTTGGAGCACAGCATTCTTTGGGAGCTGGAGACAGAGCTCATCAGAGAGTACTACTGCAACTGCAAGCAGAGAGGTTATTGCTGCCAGTGGCTTTAAACAAACAGGAAGAGTAGGGTCTCAGGGTAGTGGTGGAAACGATCACTCTTCTTCCCACAAAAGGTTGTCCAGTGAAGTTTTCCCTGAACCACTGGAAATTCAAGAGGTGGAAACTGGAGACGCCAGATGA 3087 0.4461 MDVWHRLRPPLCWLVMNLKHGNDNGLVEPVIRGIRATTLAIEEAREQHQGLSSETQRVLGLLASNSFLLTLRETAPLCKPARSKSQSHRNYATTFKELEESLQEAAEHHQCRIRASDWGYKWIQTLTSPAGQVAEEVEDETPLSNEEIIKRSVSFSNITMELRRVLLKTALVLFFIQFGLARDISSSFGIERLALRQLRSSLGIRSKYWPIKAEPCRNWTRVRCQNGRVVGINLSGLRRTRVGRLHPRLAVDSLVNFTLLESFEASGFLLNGSIPDWFGQRLGTLRRLDLSSCSLTGLIPPSLGNLSRLKFLILADNTLTGRMSSTLGQLSSLSVLNLSGNSLTGLMPSSFSSLVNLTSLDLSSNFLSGSIPSYLGNLNRLQFLNLSDNGFTAPIPYQMSNLSQLVQLDLSKNSLSGPLPGDLFSSLIFLRSLSLSRNAFDGVLPPALWSMSHLSVLDVSSNTLTGTLPKLGPNINSTVAIFNLSNNLFYGYLNTSFKKFRIIDLSGNYFQGNVPDHGLSNIALDTNCLIMSPKQRSSGDCRLFYAQRSLIFVGAQEPAPSPSAEAESRNNKRVLFILAGTFGGLVFIVILALVLALLLRKCGSSTETQKREANEGAVQEGESPMPPKNPMLDSGMGESFSYEQVLHLTGNFAEVNIIKHGHSGDLFRGILEGEVSVVVKRVDLNLVNKESFMLELELLSKASHTKLVPLLGHCLENENEKFLVYKYMPNRDLATCLHRVSGSDDKEQSLDWITRLKIAIEAAEGLCYLHDCSPPLVHRDVQASSILLDDKFEVRLGSLSEVTSQGDLNPSVITRLFRKLQSFDQNNPGSSSATWDYDVYCFGKVLLELVTGKLGISKTEDAGTREWIEQTLSYISINDKEQVNKIVDPSLIVDEDLLEEVWAMAIVARSCLNPKPFKRPPMGHVLKALENPLKIVREEYNSSSALRTTSSRRSWSTAFFGSWRQSSSESTTATASREVIAASGFKQTGRVGSQGSGGNDHSSSHKRLSSEVFPEPLEIQEVETGDAR 1028
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele27g1949 1028 SMART LRR_typ_2 282 306 IPR003591 -
Lele27g1949 1028 SMART LRR_typ_2 330 353 IPR003591 -
Lele27g1949 1028 SMART LRR_typ_2 427 451 IPR003591 -
Lele27g1949 1028 SMART LRR_typ_2 402 426 IPR003591 -
Lele27g1949 1028 SMART LRR_typ_2 354 378 IPR003591 -
Lele27g1949 1028 ProSiteProfiles Leucine-rich repeat profile. 332 353 IPR001611 GO:0005515
Lele27g1949 1028 FunFam Predicted protein 623 727 - -
Lele27g1949 1028 Coils Coil 34 54 - -
Lele27g1949 1028 MobiDBLite consensus disorder prediction 983 1028 - -
Lele27g1949 1028 Pfam Leucine rich repeat 332 390 IPR001611 GO:0005515
Lele27g1949 1028 ProSiteProfiles Leucine-rich repeat profile. 356 378 IPR001611 GO:0005515
Lele27g1949 1028 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 270 922 - -
Lele27g1949 1028 Gene3D Ribonuclease Inhibitor 350 539 IPR032675 -
Lele27g1949 1028 ProSiteProfiles Protein kinase domain profile. 652 934 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele27g1949 1028 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 324 419 - -
Lele27g1949 1028 Gene3D Transferase(Phosphotransferase) domain 1 728 951 - -
Lele27g1949 1028 MobiDBLite consensus disorder prediction 609 629 - -
Lele27g1949 1028 Pfam Leucine Rich Repeat 285 306 IPR001611 GO:0005515
Lele27g1949 1028 Gene3D Phosphorylase Kinase; domain 1 623 727 - -
Lele27g1949 1028 Gene3D Ribonuclease Inhibitor 189 349 IPR032675 -
Lele27g1949 1028 MobiDBLite consensus disorder prediction 987 1003 - -
Lele27g1949 1028 Pfam Protein tyrosine and serine/threonine kinase 657 890 IPR001245 GO:0004672|GO:0006468
Lele27g1949 1028 ProSiteProfiles cAMP/cGMP binding motif profile. 657 699 IPR000595 -
Lele27g1949 1028 SUPERFAMILY Protein kinase-like (PK-like) 625 929 IPR011009 -
Lele27g1949 1028 FunFam Putative LRR receptor-like serine/threonine-protein kinase 728 950 - -
Lele27g1949 1028 SUPERFAMILY L domain-like 217 516 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele27g1949 Lele-ChrLele27 23880697 23887941 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele27g1949 191 818 Miscellaneous Gene Families AT2G16250 47.813 0.0 562
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XIV Lele27g1949 PK_Tyr_Ser-Thr 4.5e-21 CL0016