Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele27g1933 ATGGACAGCAGCAAATTAGCTATCCTTGACGTGGATAAGTATGCAAATTTTTTGGGTATAGGTTGTGCATGTAAGTTTGGTCCCAGTCAAAGGATGATAAACGTATGGCTTGCGGCAAGCAGGAGTATTGAATTTCATTGCTGTGTTGGAAATACTTGTCTATACGTCCACGTGCAATCTGGTCGAGAAATTGCAGTGCCAGGGCCCACTTTGTTTGTTCTGTCGATCGTGGCTTGGGCCATTCAAATCATCGCAGGCTTGATTTCCAGAATGGCAAAACTCTTCAAACTGAAGCTCACAATCCCTTCGTTTCAACTGTGTCGCTCTAAAAAGCTCTCCAAATTCCCAGGAAATCCAGTTCCCGCCATTTACCGTCTTTCTCCGGTGAACCCCAAAGCACGAGATATCGCCTACCCATACATGCCGGATCCCCCTCCGACTACGCCCGAAAACCATCACCGATCCAGACCCGTTTACTGTGAATCCAGATTCTGCAAAATGGCCGGTGAGAAGGGCAAGAAACCAAAATCCACTGGAGGCCGAAGGAGTACGACGACAAGCGTTTCGACCAGGAGGAGTAACTTCCTCATGGACCAAGATGAAGAAAGCGAGAGTCTAATTTCTGGTTTGAGCAGCTTCTCCGATGAGTTTGATTTTCACGGGGCTGTCCGTGAGAGAGAAATCAGCAGGCACGTAATTAGCAGCGCAGAGAAGGTTCAGGAACAAAGATTCCAACGATCCGAAATCACAACAAAAAAGAAGAAGACGGCGACCACGAAGATGCCGGCGGAGGGATCAAGGACGCGGCGCTCGGTGGAAGGGAAGGTGAAGGAGAGCTTCGCGGTAGTAAAGAGGTCGAAGGATCCGTACGAGGACTTCAAGAAATCGATGCTAGAGATGATCACGGAGATGGAAATGTTCGAGGCCAGGGACTTGGAGCAACTCTTACAGAGTTTTCTGGCGCTCAACTCGCGGCACTATCATGGTGTAATAGCGCGAGCTTTCATGGAAATCTGGCAACGTTGA 1026 0.4893 MDSSKLAILDVDKYANFLGIGCACKFGPSQRMINVWLAASRSIEFHCCVGNTCLYVHVQSGREIAVPGPTLFVLSIVAWAIQIIAGLISRMAKLFKLKLTIPSFQLCRSKKLSKFPGNPVPAIYRLSPVNPKARDIAYPYMPDPPPTTPENHHRSRPVYCESRFCKMAGEKGKKPKSTGGRRSTTTSVSTRRSNFLMDQDEESESLISGLSSFSDEFDFHGAVREREISRHVISSAEKVQEQRFQRSEITTKKKKTATTKMPAEGSRTRRSVEGKVKESFAVVKRSKDPYEDFKKSMLEMITEMEMFEARDLEQLLQSFLALNSRHYHGVIARAFMEIWQR 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele27g1933 341 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 280 339 IPR006458 -
Lele27g1933 341 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 24 - -
Lele27g1933 341 MobiDBLite consensus disorder prediction 248 271 - -
Lele27g1933 341 ProSiteProfiles OVATE domain profile. 282 341 IPR006458 -
Lele27g1933 341 Pfam Transcriptional repressor, ovate 286 340 IPR006458 -
Lele27g1933 341 MobiDBLite consensus disorder prediction 179 201 - -
Lele27g1933 341 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 180 339 IPR038933 GO:0045892
Lele27g1933 341 MobiDBLite consensus disorder prediction 169 201 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele27g1933 Lele-ChrLele27 23806428 23808358 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Lele27g1933 Ovate 9.8e-22 No_clan