Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lele27g1926 ATGGCCATACTCTTTCATTCATTACTTGTGAGTTCCGCATTTCTTCTCACGCTCTCTTTCTGTGTCCTCACAGTTGGTTCATCTAAATTTGGTTTTGACTGGTTAGTCGCTCTCGCAGACCTAGCGGTTAAAATATGTCTCCGTGGTTGGTTGGAGTTCTGTGATCACCGCGTGTATTCTATTCTGTTCGATCTATAAACAGGTCCTTTGCTGGTTTTTCCTTTAGGAAAGATGAAATTAAGAACTAAGAAAGGATGGAAGACTTTGGTACCTCTTCATTTGAAGGGTAAATCAGCACTCCGTTTTTATCTGTTCCCCAAAGTCAATTCAAATAGCTATGGTCCTGGCGAAACTCCAGTTTATCTGAATGTATATGACTTGACGCCAATGAATGGTTATATGTACTGGACTGGCCTAGGTATCTATCACTCTGGTGTCGAAGTATATGGTGTAGAATATGCATTTGGAGCTCATGACTATCCAACTAGCGGTGTCTTTGAGGTGGAACCTCGGCAATGCCCGGGATTCAAGTTCAGGAAGTCAATATTCATAGGAACCACCTGTTTGGATCCTGTACAGGTCAGGGAGTTCATGGAACTCCAGTCAACAAACTACAATGGTGATACATATCACTTAATTGTGAAGAATTGCAACCATTTTTGCAAGGACATCTGTTACAAGCTGACAGGGAAGTCAATTCCAACATGGGTTAATCGACTGGCCAGACTAGGTTCAGCTTGCAACTGCATTCTTCCAGAAGCACTCAGAATTTCTGCTGTGAGGCATGATCCTAATTTCCAGACTCGTGAGAGTGAAAAAAGAAGGCTGCGAAGCGCCGTCAATTGTGTGTCCTCAATCTCAATGCGGCAAAAGCACTTATCAACGTCTTCACTGTTTCTACAGTCACCCCTGAGAGGCTGCTTATCGTCATGGGAATTTAGGAAGTCCATTAAAGAAAGGTAA 963 0.4289 MAILFHSLLVSSAFLLTLSFCVLTVGSSKFGFDWLVALADLAVKICLRGWLEFCDHRVYSILFDLXTGPLLVFPLGKMKLRTKKGWKTLVPLHLKGKSALRFYLFPKVNSNSYGPGETPVYLNVYDLTPMNGYMYWTGLGIYHSGVEVYGVEYAFGAHDYPTSGVFEVEPRQCPGFKFRKSIFIGTTCLDPVQVREFMELQSTNYNGDTYHLIVKNCNHFCKDICYKLTGKSIPTWVNRLARLGSACNCILPEALRISAVRHDPNFQTRESEKRRLRSAVNCVSSISMRQKHLSTSSLFLQSPLRGCLSSWEFRKSIKER 320
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lele27g1926 320 Gene3D PPPDE domains 114 267 IPR042266 -
Lele27g1926 320 SMART DUF862_2a 118 256 IPR008580 GO:0008233
Lele27g1926 320 Pfam PPPDE putative peptidase domain 119 253 IPR008580 GO:0008233
Lele27g1926 320 PANTHER DESUMOYLATING ISOPEPTIDASE 116 297 IPR008580 GO:0008233
Lele27g1926 320 ProSiteProfiles PPPDE domain profile. 118 255 IPR008580 GO:0008233
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Lele27g1926 Lele-ChrLele27 23770384 23773417 Wgd
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g0156 25 953125 956177 Lele27g1926 27 23770384 23773417 hybridization
Lele26g0167 26 965063 969005 Lele27g1926 27 23770384 23773417 hybridization