Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele27g1921 ATGGGAAAAGGCAACGTCCCTACCCCTCTCTCTCTCTCTTCCTCTTTCTCTTTCTCTGGACCTATATATACCTCCCTCATAATTCCTTCTTCCCCCCCACACTTCAGGGGCCACTCCTTACCTCCCTCCTCCGTACCAATCGGACCCATTTTTTCCGTCTTCCTCTCTCACTTATCAATGGCGTTTTGCAAATCCTTCGCCAACCGCCTCTTCCACTGTTGTAAAACCATCCCACATTCGGCAGGTTCAGAGCACACTGCATTCAAAACAAAGCTCCTTCGAGAGCGCCACGCCTCGCCTGATTCCCTACGCAGAGCCACTTACGGCCTATTTCACAACCGCAGAGGCGTATATCACTCTGGCCCCTCCGAGCTGCCCGAGTTTCTATCACTTCCCGTCGGAGAGAAACTCAGGGAGGGTCTCAAAGCCATCGGCATCAAGGGAGATCGCCTCCGCCTCGACGGTCTCGGTCCCCCGGAGAGGGAGAAAGCCAACGCCCATTCGCAGTTCGGAATTACTGTCAATGATGCGAGGAAGATCCTGAGGCTATCGCTGGCGGAGAAGCTGAAAGCGAAGCTGAGGGAGATTCCAAGGACCTCGATTTCTCACTCCGAGTATATGGAGATCTGCGTTGATGCTTCCGAGAATGTTGAAGAGGGCGCCGAGTTAGCCAAGATGCTGGATGAGTCCGGGAACGTGATCGTTTTGGGAAACGTGGTCTTCCTGCGACCTGAACAGGTGGCGAAGAGCATGGAGAGCCTAATCGGGAAGACAATAGGGCATCCAAAGGACCCGAGAAGGGTGGAACTGGAGGAGATGGAAAAGCAGAAGGCAGTGATAGATGAGAAGGCAAAAGCGTCGGTGCGAGGCGAGCTTTCCTGCGGGCTGGGATTCCTGGTGCTGCAAACCATGGGCTTCATGAGGCTCACATTCTGGGAGCTTAGCTGGGACGTGATGGAGCCCATATGCTTCTTTGTGACCTCCTTCCATTTCGCCCTCGCTTACCTCTTCTTCCTCAGGACCTCCACCGAGCCCTCCTTCCAGGGCTACTTCTTCCTCCGATTCGCCACCAAGCAACAGCGCTTGATGAACACTTACCAATTCGACACCCACCGATACCATGAGCTCTGCGCTGCCTTTTATCCTCATCGTCACGAGGCTGCTTCAAAACCTCCATTGTTTTCCCCCTCCTTCAGCCACCCTCACCCAACCATCGTCGGTTCCACGCGCCATTGA 1236 0.5445 MGKGNVPTPLSLSSSFSFSGPIYTSLIIPSSPPHFRGHSLPPSSVPIGPIFSVFLSHLSMAFCKSFANRLFHCCKTIPHSAGSEHTAFKTKLLRERHASPDSLRRATYGLFHNRRGVYHSGPSELPEFLSLPVGEKLREGLKAIGIKGDRLRLDGLGPPEREKANAHSQFGITVNDARKILRLSLAEKLKAKLREIPRTSISHSEYMEICVDASENVEEGAELAKMLDESGNVIVLGNVVFLRPEQVAKSMESLIGKTIGHPKDPRRVELEEMEKQKAVIDEKAKASVRGELSCGLGFLVLQTMGFMRLTFWELSWDVMEPICFFVTSFHFALAYLFFLRTSTEPSFQGYFFLRFATKQQRLMNTYQFDTHRYHELCAAFYPHRHEAASKPPLFSPSFSHPHPTIVGSTRH 411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele27g1921 411 PANTHER CALCIUM UNIPORTER PROTEIN, MITOCHONDRIAL 100 388 IPR039055 GO:0051560
Lele27g1921 411 Pfam Mitochondrial calcium uniporter 218 376 IPR006769 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele27g1921 Lele-ChrLele27 23745428 23747157 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g0161 25 984001 985578 Lele27g1921 27 23745428 23747157 hybridization
Lele26g0171 26 996177 996542 Lele27g1921 27 23745428 23747157 hybridization