Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele27g1920 ATGGTTCGGTGTAGTCCCTGCAGTCTGTCCAGATTTGATTGTACGCTTCGATTAGCCGTCGTCGTGTTCGAGATTCTATTGATACTGGCATGTTCGGAGGCCACAAATACACCACCTCAAGGATACCAACTTCAATCGGTAGGCGTGGGAAGAAGAAGTGAGAACATTGCATCGCACTCTTGCATCCATGATCACATACTTGAACAGAGAAGGCGACCTGGTCACAAGGTGTATTCCATTACCCCACAGGTTTATGACCCTGGCCTTCCGAAAGTCCTTCAGCACAAAGGCAGGTCATTACTTGGAGTGTCAACGCCATCAGGGACTCAAAATGATGTAAAGCAACCTATTAGAATATATCTTAATTATGATGCCGTAGGCCACTCTCCTGAGAGAGATTGTCAAAAAGTTGGTGATATCGTTAAACTTGGAGAGCCTTCAATGACAGCCCCTCCTGGTTTCCCTACTTGTAGTTCTCATGGCGATCCTCCAATTTTGGGGGATTGTTGGTACAACTGCACTGCAGAAGATATTTCAGGAGAGGATAAAAAACATCGCCTTCGCAAGGCATTAGGCCAGACAGCCAATTGGTTTAGGAGAGCATTGGCTGTTGAGCCTGTCAATGGAAACTTGCGATTAAGTGGATATTCTGCTTGTGGACAAGATGGAGGCGTGCAACTTCCTCGTGAATATGTTGAGGAGGGTGTCTCTGATGCTGACTTGGTTCTTTTGGTGACTACAAGACCTACAACTGGGAATACACTTGCTTGGGCAGTGGCATGTGAAAGGGATCAATGGGGCCGTGCCATAGCTGGACATGTGAATGTTGCTCCTCGCCATTTGACAGCTGAGGCTGAGACTTTGCTGTCAGCTACTCTGATACATGAGGTTATGCATGTTCTTGGGTTTGACCCACATGCCTTTGCTCATTTTAGAGATGAAAGGAAAAAACGTCGCGATCAGGTTACTGAACAGGTCATGGATGACAGACTTGGGAGGATGGTAACCCGTGTGGTGCTTCCACGAGTTGTCATGTATTCACGACATCACTATGGGGCATTCTCAGAAAATTTTACTGGTTTAGAGCTGGAAGATGGGGGAGGACGTGGTACATCAGGATCTCACTGGGAAAAAAGGCTTTTGATGAATGAGATTATGACTGGGTCTGTGGATACAAGATCTGTAGTTTCAAAAATGACACTTGCTCTCTTGGAAGATAGTGGATGGTACAAAGCCAATTATAGCATGGCAGATAATCTTGATTGGGGTCGCAACCAAGGTACTGAGTTTGTTTCCTCCCCTTGCAATCTCTGGAAGGGTGTCTATCATTGCAACACAACACAGTTGTCTGGTTGTACATATAATAGGGAGGCAGAAGGATACTGCCCAATTGTAACCTATAGCGTAGAACTCCCTCAATGGGCTCGATATTTTCCACAAGCTAATAAAGGTGGACAATCCTCATTGGCTGATTACTGCACTTATTTTGTTGCATACTCTGATGGATCATGCACAGACACCAGTAGTGCAAGGGCACCTGATAGAATGCTGGGTGAAGTCCGAGGGAGTAACTCTAGATGTATGGCCTCGTCATTAGTACGGACAGGATTTGTACGCGGTTCGATGACCCAGGGAAATGGTTGTTATCAGCACAGGTGTATCAATAATTCTTTAGAGGTTGCTGTGGATGGTATCTGGAAATTATGCCCTCAAGCTGGTGGACCCATTCAGTTCCCTGGATTTAATGGTGAGTTGATCTGCCCTGCATATCATGAACTCTGTATCACAAACCCTGTCGAGGTACCTGGGCAATGTCCTGGTTCTTGTAATTTCAATGGAGACTGTATTGATGGAAGGTGCCACTGCTTTCTAGGATTTCATGGTCATGATTGCAGTAGGCGCTCCTGCCCCAGGAATTGCAATGGCAAGTGCCTCTCCAATGGAATTTGTGAATGTAAAGATGGCTATACTGGCATTGACTGTTCCACCGCTGTTTGTGATGAGCAATGCAGCCTCCATGGTGGGGTTTGTGATAATGGAGTTTGTGAATTCCGTTGTTCTGACTATGCGGGATACACATGCCAGAACAGCTCCATGCTCCTCTCCAGTTTGTCAGTTTGTCAAAATGTGCTGGGAAAGGACGGGTCTGGACAGCATTGTGCACCTAGTGAACCAAGTATCCTGCAGCAGTTAGAAGAAGTAGTTGTAATGCCCAACTACCACCGACTATTTCCTGGTGGTGCTAGGAAATTATTCAACATATTTGGCAGCACTTACTGCGATGAGGCCGCTAAACAACTAGCCTGTTGGATCTCAATCCAAAAGTGTGATAAGGATGGTGACAACCGGCTCAGGGTGTGCCATTCAGCTTGTCAGTCATATAATCTAGCGTGCGGAGCTTCACTCGACTGCTCTGACCAAACCTTATTTAGCAGCGAAGGGGAAGGTAAGGGCCAGTGTACGGGCTCCGGTGAGATGAAAATGTCTTGGATTAATCGACTGCGAACTACATTTTCTTTGAGGAACAGTTCCTTGAAAGGAATTGCTGTAAAATATAGGCAACTTTAA 2568 0.4603 MVRCSPCSLSRFDCTLRLAVVVFEILLILACSEATNTPPQGYQLQSVGVGRRSENIASHSCIHDHILEQRRRPGHKVYSITPQVYDPGLPKVLQHKGRSLLGVSTPSGTQNDVKQPIRIYLNYDAVGHSPERDCQKVGDIVKLGEPSMTAPPGFPTCSSHGDPPILGDCWYNCTAEDISGEDKKHRLRKALGQTANWFRRALAVEPVNGNLRLSGYSACGQDGGVQLPREYVEEGVSDADLVLLVTTRPTTGNTLAWAVACERDQWGRAIAGHVNVAPRHLTAEAETLLSATLIHEVMHVLGFDPHAFAHFRDERKKRRDQVTEQVMDDRLGRMVTRVVLPRVVMYSRHHYGAFSENFTGLELEDGGGRGTSGSHWEKRLLMNEIMTGSVDTRSVVSKMTLALLEDSGWYKANYSMADNLDWGRNQGTEFVSSPCNLWKGVYHCNTTQLSGCTYNREAEGYCPIVTYSVELPQWARYFPQANKGGQSSLADYCTYFVAYSDGSCTDTSSARAPDRMLGEVRGSNSRCMASSLVRTGFVRGSMTQGNGCYQHRCINNSLEVAVDGIWKLCPQAGGPIQFPGFNGELICPAYHELCITNPVEVPGQCPGSCNFNGDCIDGRCHCFLGFHGHDCSRRSCPRNCNGKCLSNGICECKDGYTGIDCSTAVCDEQCSLHGGVCDNGVCEFRCSDYAGYTCQNSSMLLSSLSVCQNVLGKDGSGQHCAPSEPSILQQLEEVVVMPNYHRLFPGGARKLFNIFGSTYCDEAAKQLACWISIQKCDKDGDNRLRVCHSACQSYNLACGASLDCSDQTLFSSEGEGKGQCTGSGEMKMSWINRLRTTFSLRNSSLKGIAVKYRQL 855
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele27g1920 855 Gene3D Leishmanolysin domain 4 499 594 - -
Lele27g1920 855 ProSitePatterns EGF-like domain signature 1. 650 661 IPR000742 -
Lele27g1920 855 FunFam leishmanolysin-like isoform X2 499 594 - -
Lele27g1920 855 PRINTS Leishmanolysin (M8) metalloprotease family signature 398 427 IPR001577 GO:0004222|GO:0006508|GO:0007155|GO:0016020
Lele27g1920 855 PRINTS Leishmanolysin (M8) metalloprotease family signature 245 274 IPR001577 GO:0004222|GO:0006508|GO:0007155|GO:0016020
Lele27g1920 855 FunFam leishmanolysin-like peptidase isoform X2 311 435 - -
Lele27g1920 855 FunFam Peptidase M8, leishmanolysin 110 300 - -
Lele27g1920 855 Gene3D Leishmanolysin domain 3 438 497 - -
Lele27g1920 855 FunFam leishmanolysin-like peptidase isoform X2 438 497 - -
Lele27g1920 855 Pfam Leishmanolysin 156 597 IPR001577 GO:0004222|GO:0006508|GO:0007155|GO:0016020
Lele27g1920 855 Gene3D Laminin 604 632 - -
Lele27g1920 855 SUPERFAMILY Metalloproteases ("zincins"), catalytic domain 113 601 - -
Lele27g1920 855 PANTHER LEISHMANOLYSIN-LIKE PEPTIDASE 54 814 IPR001577 GO:0004222|GO:0006508|GO:0007155|GO:0016020
Lele27g1920 855 Gene3D - 110 300 - -
Lele27g1920 855 Gene3D Laminin 633 699 - -
Lele27g1920 855 Gene3D Leishmanolysin , domain 2 310 435 - -
Lele27g1920 855 ProSitePatterns EGF-like domain signature 2. 650 661 IPR000742 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele27g1920 Lele-ChrLele27 23729284 23735931 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g0162 25 995195 1001717 Lele27g1920 27 23729284 23735931 hybridization
Lele26g0172 26 1011024 1017647 Lele27g1920 27 23729284 23735931 hybridization