Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele27g1918 ATGTGCGGTTCCCGAACGCTCACCTCTTCTGATTCCTCCCCGAACAATATCCCAGTATCAGATTCAGAATTCCTAACAACAGCGAGGAACGCCTATTATTCTTCCAATCCCCCTCGACAACTCATCTGTCAGCTCTTGCTCGTTACGGAAGGGAGGTTTTCCAACAGTTCCTCGAAGAAGATGGAAGTTTCCAGACCTCTGAAATCTGATTGTAGATTAAAGCACCGTTCTCTGACCCCTATTAGGATTTTAAGGGGGGGTTTATGTTTAGTTGTGTTTATTTCTACAGCTTTTATGTTTTTAGCCTATTTTACACCTGTGGCAGCTGTGTTAATGCGGCTTTTCAGTGTGCGTTGTAGTAGGAAGGCCGTTTCATTCCTCTTTGGACTTTGGCTAGCCCTATGGCCTTCTTTATTTGAAAAGATAAACAAAACTAAAGTGGTCTTTTCTGGAGATAGTATCCCGATGAAGGAACGTGTTTTACTTATTGCAAATCACAGAACTGAGGTTGATTGGATGTACTTGTGGAATCTAGCACTCCGAAAGGGAAGTCTGGGCTACATAAAATACATTCTTAAGAGCAGCTTGATGAAGCTGCCTATCTTCGGTTGGGGATTTCACATTCTGGAGTTCATTGCAGTGGAGAGGAAGTGGGAGATAGATGAGCCAATATTGATCAGTACACTTTCCACATTAAAGAACCGTCAAGATCCTCTGTGGCTAGCCATTTTCCCGGAAGGAACTGATTATACCGAAGAGAAGAGCAAAAAGAGTCAAAATTATGCAGCTGAAGTTGGGCTTCCTGTGCTAAAAAACGTGCTACTTCCAAAAACTAAAGGGTTTTATGCTTGCTTGGAAGTTCTACGAGACTCACTGGATGCAGTATATGATGTGAGCATTGAGTACAAGAATCAACGTCCTTCTTTTCTGGACAATGTCTTCGGGATCGATCCTTCAGAAGTGCACATACATGTTCGGCGAATCCCTATTGATGACATTCCAGCTTCCGAAACCAAAGTTGCTTCTTGGCTAATGAATGCGTTCCAGATCAAGGACCAGTTGCTTTCTGATTTCTACATTGAAGGCCAATTCCCTAACCAGCTAAATGAAAGGGAACTTTCTACGTTCAAGTGCCTGGTTACTTTTGCTGCGGTGGTTTCTTTGACTGCCGTGTTCACTTATCTTACATTTTTTTCTCTCATTTGGTTCAGGGTCTATGTAGGCCTGTCTTGTGTATATCTTGCTATTGCCACACGTTTCAAACTGAAATTGATGCCACTTGCAGATTATGTTAACGCACTCTTTTACGGCAAGAAACAAAAGAGTGGATAA 1332 0.4242 MCGSRTLTSSDSSPNNIPVSDSEFLTTARNAYYSSNPPRQLICQLLLVTEGRFSNSSSKKMEVSRPLKSDCRLKHRSLTPIRILRGGLCLVVFISTAFMFLAYFTPVAAVLMRLFSVRCSRKAVSFLFGLWLALWPSLFEKINKTKVVFSGDSIPMKERVLLIANHRTEVDWMYLWNLALRKGSLGYIKYILKSSLMKLPIFGWGFHILEFIAVERKWEIDEPILISTLSTLKNRQDPLWLAIFPEGTDYTEEKSKKSQNYAAEVGLPVLKNVLLPKTKGFYACLEVLRDSLDAVYDVSIEYKNQRPSFLDNVFGIDPSEVHIHVRRIPIDDIPASETKVASWLMNAFQIKDQLLSDFYIEGQFPNQLNERELSTFKCLVTFAAVVSLTAVFTYLTFFSLIWFRVYVGLSCVYLAIATRFKLKLMPLADYVNALFYGKKQKSG 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele27g1918 443 Pfam Acyltransferase C-terminus 314 382 IPR032098 -
Lele27g1918 443 PANTHER 1-ACYLGLYCEROL-3-PHOSPHATE ACYLTRANSFERASE-RELATED 78 416 - -
Lele27g1918 443 SUPERFAMILY Glycerol-3-phosphate (1)-acyltransferase 96 268 - -
Lele27g1918 443 CDD LPLAT_LCLAT1-like 138 326 - -
Lele27g1918 443 Pfam Acyltransferase 149 302 IPR002123 GO:0016746
Lele27g1918 443 SMART plsc_2 160 282 IPR002123 GO:0016746
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele27g1918 Lele-ChrLele27 23721211 23724888 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele27g1918 61 426 Miscellaneous Gene Families AT1G75020 67.213 0.0 512
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g0165 25 1006103 1007779 Lele27g1918 27 23721211 23724888 hybridization
Lele26g0174 26 1022230 1024523 Lele27g1918 27 23721211 23724888 hybridization