Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele27g1914 ATGGGGAATCAACCTGCTAAAGGATTTTGCGGACTGAAAACGAGGACGAGGAGTGATCCAAAGGGTTTCATTCATCACCAAGCTTCTCCGTCGCACGTAGGGATAAGAACGGTGGACGTGGACAGAGTTTGTAACTTGTCCACCGGTTCAGATCTCTGCATCTCCATAGTGACCTGGAATATGAAGGGCCAGGTTGCCTTTGAGGATCTAGAAGAGATGGTCGGGGACAAGTGCGAGTTTGATCTTCTGGTCATTGGCTTGCAGGAGGCTCCGCGAAACAAAGTTGCAAAGAAGCTGAAAGCAGCTCTGGTTGATACTCACATCCTGATAGGTAAAGTTACCATGCAGTCTTTGCAGTTGTACCTGTTCGGGCCCAAGAATGCTGGATCATTAACTAGAGAATTGAAGGTGGACAAAAAATCAGTTGGAGGCTGCGGAGGAATAATAGGAAGGAAAAAAGGGGCAGTGGCAATCTGGATTAACTACAAATCCATAAGGATGGTGTTCATTTCTTGCCATCTCTCAGCTCATGCGCGCAGAGTAGAAGAAAGGAATTCAGAATGCAGGCACATATCACACTCCCTCTTCTCCAAGAACTGGAATCCATATGCCAGACCAGCCCACGTAACTGTTTGGATGGGAGATCTCAACTACAGGCTACAAGGCATTGATACCCACCCGGCCAGAGCTCTCATCCAAAAGGACCTCCACAAACTGCTTGTCAAAGATCAGCTCTTACTGGAGGCTGGACGAGGACAGATTTTCAATGGGTATTGTGAGGGCACATTGACATTCAGGCCAACTTACAAGTATAACGTAGGAAGTAGCAACTATGATACCAGTTATAAGGTGAGGGTGCCAGCTTGGACAGATCGTATATTGTTCAAGGTAGAAGACGAAGATGACATGGAAGCAATCTTAGACTCGTATGAATCAATGGATGAGATAAACGGTTCTGATCATAAGCCAGTGAAGGCTCGACTGTGCTTAAGACTTCGTCAAACCTCCCCAGTACTTGAGATTCTGCATCTATTAAGGGGTAGAAATTAA 1050 0.4619 MGNQPAKGFCGLKTRTRSDPKGFIHHQASPSHVGIRTVDVDRVCNLSTGSDLCISIVTWNMKGQVAFEDLEEMVGDKCEFDLLVIGLQEAPRNKVAKKLKAALVDTHILIGKVTMQSLQLYLFGPKNAGSLTRELKVDKKSVGGCGGIIGRKKGAVAIWINYKSIRMVFISCHLSAHARRVEERNSECRHISHSLFSKNWNPYARPAHVTVWMGDLNYRLQGIDTHPARALIQKDLHKLLVKDQLLLEAGRGQIFNGYCEGTLTFRPTYKYNVGSSNYDTSYKVRVPAWTDRILFKVEDEDDMEAILDSYESMDEINGSDHKPVKARLCLRLRQTSPVLEILHLLRGRN 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele27g1914 349 Pfam Endonuclease/Exonuclease/phosphatase family 57 321 IPR005135 GO:0003824
Lele27g1914 349 PANTHER INOSITOL 5-PHOSPHATASE 41 334 - -
Lele27g1914 349 Gene3D Endonuclease/exonuclease/phosphatase 35 342 IPR036691 -
Lele27g1914 349 SUPERFAMILY DNase I-like 44 332 IPR036691 -
Lele27g1914 349 SMART i5p_5 50 336 IPR000300 GO:0016791|GO:0046856
Lele27g1914 349 FunFam Type IV inositol polyphosphate 5-phosphatase 11 32 337 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele27g1914 Lele-ChrLele27 23702851 23707625 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele27g1914 58 332 Acyl Lipid Metabolism Gene Families AT2G43900 29.023 1.65e-26 109
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g0169 25 1025415 1027832 Lele27g1914 27 23702851 23707625 hybridization
Lele26g0177 26 1038069 1046962 Lele27g1914 27 23702851 23707625 hybridization