Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele27g1913 ATGACTTCGTATGTGCTTCTTCGTCATTCTTTAGTATGTCTGAACATGATTAGAGGAAAGATCATTCTGGCTTGTGATGTTAAGCGAAGAGAGCAACCCCAGCCTCCTTGTCTAACAGACGTGGAGTCAGATAGATTAAGTTGCTCACCGGGTCATGTTATAGACCAAATTCTGTCACATTTGTCAATTCGGGAAGCAGTGAGGACAAGTGTTCTATCCAGCAAATGGAGGTACAAATGGTCTACTCTACCAACTCTTGTGTTTGATAACCAGTGTCTCCCCATATCTTCCCAAGATCATTCAATTATCAAGAACAAGCTTGTGAGAATTATTGATCATGTGCTTTTGCTTCACTCTGGTGCAATAAACAAGTTCAAGCTCTCCCATCGTGATCTAATTGGTGTGACTGACATTGATCTTTGGACTCTTCATCTAACCAGAAGGTCTATCAAAGAGCTTGTGCTGGAAATCTGGAAAGGGCATCGCTACAAGATACCCTCTTGTTTATTTACTTGCCAAAGTTTAATTCATTTGGAATTATTTAACTGCTGGCTTAAGCCTCCATCAACATTTGTAGGCTTCAGGAACTTGAAGAGTCTTGATCTACAGCATGTTACCATGGATCAAGATGTGTTTGAAAACTTGATATCTAACTGCCTACTGCTTGAACGTCTAACACTGATGAACTTCGATGGCTTCACTCATCTCAACATTGATGCACCGAATCTTCAGTTTTTTGACATTGGAGGCAAATTTGAGGAAGTTAGATTTGAGAACACTTTCCATTTAGCTGTTGTATCCATTGGGTTGTATTTGAACCTTGAAAACGAGAAAAATAGATGGCGAGGAAGTTCTAGCAACTTGTTCAAGTTCTTTGTTCATCTACCTCATGTTAGAAGGTTGGAGGTTCTAAGCTATTTTTTAAAGTATTTGGCAGTAGGGGTTGTGCCACTAAAGCTTCCTAGACCATGCGTAGATTTAACTTATCTTTCCATACGCATCAATTTCAACGATTCCAAGGAAATTTCAGCTGCTTTGTGCCTTTTAAGGAGTTCTCCGAATCTTCAAGAACTGGAAGTGTTGGCTCGCACTGAGGAGCAACAGACTACTCTGGGAACACAGGCCTACTGTTGGGAGGATGAGTATTGGAATTGCCCAGTGATGCAACTGCAATTTGTTATGATAGACGGTATCTCTGGCATCGAACCCGAACTAGATTTTATCAGCTTTCTGCTTTTGTATTCTCCCGTTCTAGAACGGATGACTGTGAAACCTGCTTCTTCAAATGGAGGATCAGAGTTAATGAAAGAACTATTGCGCTTCAGGAGAGCGTCAGGACGGGCTGAAATTATATACCTGGATCCTTGA 1368 0.4101 MTSYVLLRHSLVCLNMIRGKIILACDVKRREQPQPPCLTDVESDRLSCSPGHVIDQILSHLSIREAVRTSVLSSKWRYKWSTLPTLVFDNQCLPISSQDHSIIKNKLVRIIDHVLLLHSGAINKFKLSHRDLIGVTDIDLWTLHLTRRSIKELVLEIWKGHRYKIPSCLFTCQSLIHLELFNCWLKPPSTFVGFRNLKSLDLQHVTMDQDVFENLISNCLLLERLTLMNFDGFTHLNIDAPNLQFFDIGGKFEEVRFENTFHLAVVSIGLYLNLENEKNRWRGSSSNLFKFFVHLPHVRRLEVLSYFLKYLAVGVVPLKLPRPCVDLTYLSIRINFNDSKEISAALCLLRSSPNLQELEVLARTEEQQTTLGTQAYCWEDEYWNCPVMQLQFVMIDGISGIEPELDFISFLLLYSPVLERMTVKPASSNGGSELMKELLRFRRASGRAEIIYLDP 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele27g1913 455 Gene3D Ribonuclease Inhibitor 107 378 IPR032675 -
Lele27g1913 455 SUPERFAMILY F-box domain 45 88 IPR036047 GO:0005515
Lele27g1913 455 SMART 9598neu4hmm 384 453 IPR006566 -
Lele27g1913 455 PANTHER F-BOX PROTEIN-LIKE 44 427 - -
Lele27g1913 455 SUPERFAMILY RNI-like 135 359 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele27g1913 Lele-ChrLele27 23698044 23700452 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele27g1913 41 263 EF-hand Containing Proteins AT5G41840 24.490 6.17e-11 62.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g0170 25 1030669 1032433 Lele27g1913 27 23698044 23700452 hybridization
Lele26g0178 26 1047336 1052736 Lele27g1913 27 23698044 23700452 hybridization