Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele27g1908 ATGGCTTCCTCCTCTTCCCTCTCCTCCCCTTCCCTCCTACTTCAATCTCCTCCCACCTCCATATCACCCACTCCCTCCCCTCCCCCTCCGTTTTACCTTCTTCCCATCCGAGCCTCCGGTCCCCCGCTGTCGGTGGCTGCTCATGACGCCCCCAAGCTTCCTCTTCGCAAAATCCCCGGTGACTATGGCATCCCTGTCATAGGTCCCTACAAGGATCGACTCGACTACTTCTACAACCAGGGTCGCGACGAATACTTCAAATCACGCATCAACAAGTATCAGTCAACGGTGTTCCGCACCAATATGCCCCCTGGTCCCATGATTGCTCCCAACCCCCAGGTCGTCGTCTTGCTCGACGGCAAGAGTTTCCCCGTCCTCTTTGATGTCACCAAGGTCGACAAGACTGATCTCTTCACCGGCACTTACATGCCTTCCACCGAACTCACCGGCGGCTACCGAGTTCTCTCCTATCTCGACCCCTCCGAGCCCAAACACGGCCTCCTCAAGCGCCTCATATTCTTCCAACTTAAGTCTCGCCGCGACCACGTCATCCCCGAGTTCCATTCCTCCTACACCGCCCTCTTCGAGACCTTAGAAAACGATCTCACCGCCAAGGGGAAAGCAAACTTCGGAGACGCCCACGATCAGGCCGCCTTTAACTTTCTGGCTCGCGCCCTTCACGGCTTTAACCCCGCGGACACCAAGCTGGGATTGGACGGCCCGAAGCTCGTTCAGAAGTGGGTTCTGTTCCAACTCAGTCCTATCCTGAATCTGGGGCTTCCCAAGCTCATCGAAGACTCTATATTCCACAGCGTCCGTCTACCTCCGTTCTTGGTGAAAGCCGATTACCAGAGGCTGTACGATTTCTTCTACGAGTCGTCCGGGTTCGTGCTGGACGAAGCAGAGCGGTTGGGAGTGTCGAGAGAAGAAGCTTGCCACAACCTCCTATTTGCCACGTGCTTCAACGCCTTTGGAGGAATGAAGTTTTTCTTCCCGAACGCGGTGAAGTGGATCGGCAGAGCAGGGGTGAAACTGCATACACAGTTAGCGGAGGAGATCCGATCGGCGGTGAGATCGAATGGCGGAGGGGTGACGATGGAAGCGATGGAACAGATGCCACTGATGAAATCGGTGGTTTACGAAGCGTTGAGGATAGAGCCGCCGGTGGCGCTACAATACGGGAGAGCAAAGCGAGACCTGGTGATAGAGAACCACGAGAACAGATTCGAAGTGAAAGAAGGGGAGCTGTTATTCGGGTATCAGCCGTTCGCGACCAAGGATCCCAAGATATTCGAGAGAGCGGAAGAGTTCGTAGGGGACAGGTTTGTAGGGGAAGGTGAGAAATTGCTGAAGCACGTGCTGTGGTCGAATGGGCCGGAGACAGGATCTCCGACGGTGGGGAACAAACAATGTGCGGGGAAGGATTTTGTAACGTTGGTGTCGAGATTGCTGGTGGTGGAGCTGTTCCTCCGATACGATTCATTCGATATCCAAGCGGCAAAGTCTCCGTTGGGTTCCTCCATAACCGTCACATCTCTCAAGAGAGCCAGCTTTTAG 1557 0.5504 MASSSSLSSPSLLLQSPPTSISPTPSPPPPFYLLPIRASGPPLSVAAHDAPKLPLRKIPGDYGIPVIGPYKDRLDYFYNQGRDEYFKSRINKYQSTVFRTNMPPGPMIAPNPQVVVLLDGKSFPVLFDVTKVDKTDLFTGTYMPSTELTGGYRVLSYLDPSEPKHGLLKRLIFFQLKSRRDHVIPEFHSSYTALFETLENDLTAKGKANFGDAHDQAAFNFLARALHGFNPADTKLGLDGPKLVQKWVLFQLSPILNLGLPKLIEDSIFHSVRLPPFLVKADYQRLYDFFYESSGFVLDEAERLGVSREEACHNLLFATCFNAFGGMKFFFPNAVKWIGRAGVKLHTQLAEEIRSAVRSNGGGVTMEAMEQMPLMKSVVYEALRIEPPVALQYGRAKRDLVIENHENRFEVKEGELLFGYQPFATKDPKIFERAEEFVGDRFVGEGEKLLKHVLWSNGPETGSPTVGNKQCAGKDFVTLVSRLLVVELFLRYDSFDIQAAKSPLGSSITVTSLKRASF 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele27g1908 518 MobiDBLite consensus disorder prediction 1 19 - -
Lele27g1908 518 PRINTS E-class P450 group IV signature 471 489 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lele27g1908 518 PRINTS E-class P450 group IV signature 372 388 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lele27g1908 518 PRINTS E-class P450 group IV signature 425 443 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lele27g1908 518 PANTHER CYTOCHROME P450 26 53 492 - -
Lele27g1908 518 FunFam Allene oxide synthase, chloroplastic 53 518 - -
Lele27g1908 518 SUPERFAMILY Cytochrome P450 54 493 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lele27g1908 518 Gene3D Cytochrome P450 49 518 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lele27g1908 518 Pfam Cytochrome P450 347 493 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lele27g1908 518 MobiDBLite consensus disorder prediction 1 26 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele27g1908 Lele-ChrLele27 23674037 23675593 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele27g1908 18 518 Cytochrome P450 AT5G42650 66.275 0.0 681
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g0174 25 1053325 1054881 Lele27g1908 27 23674037 23675593 hybridization
Lele26g0184 26 1077747 1079306 Lele27g1908 27 23674037 23675593 hybridization