Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele27g1889 ATGCAGGGAAGCTTGCGGGAGGCCGCGGCAAGAGCAGCTAAAGGTGGAAAAGCTTCGGGCAGAGATAGAAAAATGGCTCTGCAACAAGACGTTGATAAGTTGAAGAAGAAGCTCAGGCATGAAGAGAATATCCACAGGGCACTGGAGAGGGCTTTAAACCGGCCGTTGGGAGCTCTGCCTCGTCTTCCTCCTTTTCTCCCCCCTTACATACTAGCGCTGCTGGCGGAAGTGGCGGTTCTGGAAGAGGAAATAGTAAGGCTTGAAGAGCAGGTCGTGGATTTGAGGCAGGACATGTACGAGGAAGCCGTGTACATGTCATCTTCTAGAAGAAGAATGGAGCATTTAGCTCATTTTAACAAAGGAAATTCGATTGGAAGTCCCAAGCCTGACAAATTGAAGTCTTTTCCCCAAACAACAACGAATTCTGCTATAAAACTTCCGGAGGATAAACACGGAAAAGAAAACCAATCTTGTTCTAATTCTTCCAAGAGCAGCAATAAATCGAAACGTCCAGGCCAAACGACCAAGACTGCAATTACAAAACTTCCCATTGACAATAAATCAGTGAAGAAACATAGAGGTCCTCCAGTGAGGCAGCCACAAGTAAGGCTGAACGATTATCCAATTGCGGAAATGATAAATCCGAGTGCACATGAAAAACCGACCGGAGATGAAAGCCCGAATACAATATCCGAAAATATTGTGAAGTGTTTATCAAGCATTCTCTTGAGAATGAGTTCAGTGAAGAATACTGGGGCTGCAGATGATACACCATCCTTAAGGATTCGGAAAACTCGAACCTCTGTTGAAGGAGCAGAATCTAGGGATCCTTATGGGATCTGTTCCCAATTTGGAAAGAGGGATATTGGTCCTCACAAGCAATTATGTGCCATTGAAGCTAAATCTTTCAATCCAAAAAGAACTGCAAATTCTCAGTTTTTACTGAGTCGACTGAAACTTCTTCTTCGGAAACTTGCCTCTGTCAGCTTGGAGAACCTCAACTATCAGGAGAAGCTTGCATTCTGGATCAACATTTATAATTCCTGCATGATAAATGCATTAATAGAGAATGGCTGCCCAGAGAGTCCTGAAATGACGGTTGCGCTGATGCGGAAGGCAACAATAAATGTGGGCGGATATATGCTAAGCGCAACCACCATAGAACATTGCATCCTGAGGCTTCCTTATCGCTGGAAATTGGCATTTTCCAAGGGAGCGAAGAATCATGAAATGACAGCAAGGAGCACATTTGGACTGGAATTGTCAGAGCCCCTAGTCACATTTGCACTCTCCTGTGGCACTTGGTCTTCTCCTGCAGTGAGAGTGTACACGGCATCTGAGGTTGAGAAGGAATTGGAAGTGGCAAAAAGAGAGTATTTACAGGCCGCTATTGGAATTTCGACATCCAAATTTGCAATCCCAAAACTGCTAAGTTGGTATTTGCTGGACTTTGCAAAAGACTTGGAGTCGTTGCTGGATTGGATTTGCCTGCAGTTGCCAAGTGAACTTGGGAAAGAAGCCATGCGTTTCCTCGAGGAAAGAAAAAACCAGCCCCTCTCTCAATTTGTACAGATTATTCCTTATGAGTTTACTTTTAGATACCTGATATGCTCATAA 1617 0.4428 MQGSLREAAARAAKGGKASGRDRKMALQQDVDKLKKKLRHEENIHRALERALNRPLGALPRLPPFLPPYILALLAEVAVLEEEIVRLEEQVVDLRQDMYEEAVYMSSSRRRMEHLAHFNKGNSIGSPKPDKLKSFPQTTTNSAIKLPEDKHGKENQSCSNSSKSSNKSKRPGQTTKTAITKLPIDNKSVKKHRGPPVRQPQVRLNDYPIAEMINPSAHEKPTGDESPNTISENIVKCLSSILLRMSSVKNTGAADDTPSLRIRKTRTSVEGAESRDPYGICSQFGKRDIGPHKQLCAIEAKSFNPKRTANSQFLLSRLKLLLRKLASVSLENLNYQEKLAFWINIYNSCMINALIENGCPESPEMTVALMRKATINVGGYMLSATTIEHCILRLPYRWKLAFSKGAKNHEMTARSTFGLELSEPLVTFALSCGTWSSPAVRVYTASEVEKELEVAKREYLQAAIGISTSKFAIPKLLSWYLLDFAKDLESLLDWICLQLPSELGKEAMRFLEERKNQPLSQFVQIIPYEFTFRYLICS 538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele27g1889 538 MobiDBLite consensus disorder prediction 1 29 - -
Lele27g1889 538 MobiDBLite consensus disorder prediction 157 182 - -
Lele27g1889 538 MobiDBLite consensus disorder prediction 143 200 - -
Lele27g1889 538 Coils Coil 17 51 - -
Lele27g1889 538 Pfam Leucine-zipper of ternary complex factor MIP1 21 101 IPR025757 -
Lele27g1889 538 Pfam Protein of unknown function, DUF547 331 460 IPR006869 -
Lele27g1889 538 Coils Coil 70 97 - -
Lele27g1889 538 PANTHER EXPRESSED PROTEIN 12 536 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele27g1889 Lele-ChrLele27 23568000 23570932 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele27g1889 27 23568000 23570932 Lele02g0859 02 5210313 5217114 CCT
Lele27g1889 27 23568000 23570932 Lele03g0873 03 5081525 5084711 CCT
Lele02g0874 02 5309448 5311604 Lele27g1889 27 23568000 23570932 CCT
Lele03g0891 03 5172576 5174746 Lele27g1889 27 23568000 23570932 CCT
Lele04g0888 04 5469363 5471543 Lele27g1889 27 23568000 23570932 CCT
Lele25g0198 25 1160145 1163074 Lele27g1889 27 23568000 23570932 hybridization