Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele27g1877 ATGAGAGGATCCTCCCCAAACATCGTAGAGCCTAGGCACCGGCCGTCGGCCTCAACTAATGACGATACTAACAAGAGAAGATCTCAAAGAAGTAGATACTTCAACGATGTTGAGAAGGCATTACATGCTCCATTTCAGGATAGGAGTATAAATTGCAAGCCCACCTGGAAATTGGTGATGGTTGTTATTTTATTAGGAACCCTAGTCACAATTTTCCATCCTCCAGCAATTTATGACACTGATCCTCTGTCAAACTCCATGTCGAGGCCAACTTTTGTTGACAAATGGAAAAGAGAGTTTGGTACTACTGATCAGCGTTATGCTTCTCTTGTAAATGTTGAGTGGGGCCAAATATCGAAAGTTCTTGCAAAATTGACAGATATGAACACATATCAGGGAGTTGGTTTGTTTAACTTTAATGAAAGTGAGATTGACCACTGGAAACAGCTAATACCAGATGCTGAGCACATAGTTCTTCATCTGAACTATGCTTCAAGTAACATAACATGGGAAGTCCTGTACCCTGAATGGATTGATGAAGAAGAAGAATTTGAAGTTCCTGTTTGTCCTACACTACCAAAAATTCAAGTGCCTGGAAAACCGAGGCTTGATCTTGTTGCTGCCAAACTTCCCTGCAACAAGTCAGGGAGATGGTCAAGAGATGTGGCTCGTTTGCACCTGCAACTTGAGGCAGCAAGGCTTGCAGCCTCTTCCAAAGGGCATCATCCAGTGCGTGTGCTTTTTGTCACTGACTGCTTTCCTACCCCAAATCTCTTTACATGCAAGGAACTCGTTCAACGTGAAGGTAATGCATGGCTTTATGAACCTAAGCTACATAGTCTGAGAGCTAAGCTACAACTGCCAGTTGGATCATGTGAACTATCAGTTCCTCTTACCGCTAAAGAAAATTTTTACTCGGAAAGGGCACACCGAGAAGCTTATGCAACCATCCTGCATTCTGCACATGTATATGTTTGTGGAGCCATTGTTGCTGCTCAGAGTATTCGCATGGCTGGTTCAACAAGAGATCTTGTGATTTTAGTGGATGAGTCCATTAGCGACTATCATAGGGGGGGCCTGGAGGCTGCTGGATGGAAGATTCATACTATCAAAAGAATCAGGAACCCAAAAGCTGAGCCAGAGGCATACAATGAGTGGAATTATAGCAAATTCCGGCTTTGGCAGCTAACAGAATATGACAAAATTATTTTCATCGATGCTGACCTGCTTATACTGAGGAATATCGATTTCCTCTTTGAGATGCCTGAGATATCAGCCATAGGAAATAATGCCACCCTTTTCAACTCGGGAGTAATGGTAATTGAACCATCACAATGTACATTTCAGTTGCTAATGGATCACATTAATGAGATCGTCTCCTACAATGGTGGGGACCAGGGGTATCTCAATGAAATATTCACATGGTGGCATCGGATTCCAAGACACATGAACTTTTTGAAGCACTTCTGGGAAGGTGATGAGGAGGAGAAAAAGGAGATGAAAACCCGTCTCTTCGGAGCTGATCCTCCAATTCTTTATGTCCTCCATTATTTGGGTAATAAACCCTGGCTTTGCTTCCGAGATTATGACTGCAACTGGAATGTGGACATTCTCCGGGAGTTTGCCAGTGACGTGGCTCATGCGACATGGTGGAAGGTGCACGATGACATGCCAGAGAAGTTACAGAATTTCTGTTTGCTGAGGTCCAAGCAGAAGGCACAAGTAGAGTGGGATCGCAGACAAGCAGAGAAAGGGAACTATTCTGATGGTCACTGGAAAATTAAGATAAAAGACAAGCGTTTAAAAACATGCTTTGAGGATTTCTGCTTCTGGGAGAGCATGTTATGGCACTGGGGCGAAAAGAATTGGACAGATAATTCAACAGCTACAAATTCACTACCTGCCATCGCTACCAAATCTCTATCTTCCTTATAA 1935 0.4326 MRGSSPNIVEPRHRPSASTNDDTNKRRSQRSRYFNDVEKALHAPFQDRSINCKPTWKLVMVVILLGTLVTIFHPPAIYDTDPLSNSMSRPTFVDKWKREFGTTDQRYASLVNVEWGQISKVLAKLTDMNTYQGVGLFNFNESEIDHWKQLIPDAEHIVLHLNYASSNITWEVLYPEWIDEEEEFEVPVCPTLPKIQVPGKPRLDLVAAKLPCNKSGRWSRDVARLHLQLEAARLAASSKGHHPVRVLFVTDCFPTPNLFTCKELVQREGNAWLYEPKLHSLRAKLQLPVGSCELSVPLTAKENFYSERAHREAYATILHSAHVYVCGAIVAAQSIRMAGSTRDLVILVDESISDYHRGGLEAAGWKIHTIKRIRNPKAEPEAYNEWNYSKFRLWQLTEYDKIIFIDADLLILRNIDFLFEMPEISAIGNNATLFNSGVMVIEPSQCTFQLLMDHINEIVSYNGGDQGYLNEIFTWWHRIPRHMNFLKHFWEGDEEEKKEMKTRLFGADPPILYVLHYLGNKPWLCFRDYDCNWNVDILREFASDVAHATWWKVHDDMPEKLQNFCLLRSKQKAQVEWDRRQAEKGNYSDGHWKIKIKDKRLKTCFEDFCFWESMLWHWGEKNWTDNSTATNSLPAIATKSLSSL 644
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele27g1877 644 MobiDBLite consensus disorder prediction 1 29 - -
Lele27g1877 644 Pfam Glycosyl transferase family 8 318 524 IPR002495 GO:0016757
Lele27g1877 644 SUPERFAMILY Nucleotide-diphospho-sugar transferases 312 563 IPR029044 -
Lele27g1877 644 PANTHER GLYCOGENIN SUBFAMILY MEMBER 220 604 - -
Lele27g1877 644 CDD GT8_Glycogenin 312 557 - -
Lele27g1877 644 FunFam Hexosyltransferase 309 561 - -
Lele27g1877 644 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 309 560 IPR029044 -
Lele27g1877 644 MobiDBLite consensus disorder prediction 15 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele27g1877 Lele-ChrLele27 23491595 23495325 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele27g1877 3 620 Glycosyltransferase AT1G77130 69.920 0.0 884
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g0208 25 1240105 1247600 Lele27g1877 27 23491595 23495325 hybridization
Lele26g0219 26 1266385 1273253 Lele27g1877 27 23491595 23495325 hybridization