Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele27g1870 ATGTCGTTAGTTAGATCTGCAGAGCTGCCTGCTACACCTTATAGAAATGCCAAGCTCTACTCAATCAAGGGAACTGATGTTAGGCCTGGCTTTCCCTCCCAAATTTTTGGTCCTGATAAGCACAGAACCATGTACATAACAGATTCTTACTCCAGTGAGAGTTATGAGAAGTACTTTCACAATTCACCAACTGAAGAACTGATAGAAACTCCTACTTCCAGCATCTCAGGAAGCTCCCTGCCCGATGGCTCATCCTATCCTGTTAGAGCTAGTTCAGGAGCTTCTGTGGCTGCTAACAACCCATTTGACATTTCTTTGGTGTCCACGAGACATGGTGATGCCTGTCGGTCCAACTTTGGATCAGATTTCTTGGAAAATGGGAGCCCAGATCCACTTGACTTTGATGATCAAATGAAATTAAAACTCCAAGAATTAGAGAGGACACTGCTTGGGGATAACAACGATGATTATGAGGAGGATTTCATACTTGGGACTTTTCAAAGCATGGATATTGATGCTGAGTGGGCTGAACCCATTCAGAATATGCCGCACCATGGCTCACCAAAGGAGTCTTCATCGTCAGATTCTAACCATAGTATCATTAGTAGTATCTCTCCTCGGACCCCAAAGCAATTGCTGTTAGAGTGTGCCGGTGTGATTTCAGAAGGAAATGCAGAGGAAGCGTCGTCTATGATAAATGAACTCCGGCAGATGGTATCAATTCAGGGAGATCCTCCCCAGAGGATTGCAGCCTATATGGTGGAAGGGCTTGCAGCTCGAATAGCTGAATCTGGCAGCAGTATTTATAAAGCACTCAAGTGCAAGGAACCTCCTTCCTCAGACCGACTGGCAGCGATGCAAATACTGTTTGAGGTGTGCCCATGTTTTAAATTTGGATTTATTGCCGCAAATGGTGCAATTACGGAGGCAGTTCAAGATGAAAAGAAGGTTCACATAGTAGATTTTGACATCAATCAAGGAAATCAATACATAACTCTGATACAAGCACTTGCTTCAACGACGGTTAAGCCACCACATGTGAGATTAACCGGGGTTGATGATCCTGAGTCTGTCCAGCGATCTGTTGGAGGCCTAAAAATCATTGGACAAAGACTTGAAAAACTTGCAGAAATACTTGGATTGCCGTTTGAATTTCGAGCAGTGGCATCGAGGTCTTCCCTTGTCACTCCATCAATGCTCGATTGTCGTCCTGGGGAAGCCCTCGTGGTGAATTTTGCATTCCAGCTTCATCACATGCAAGATGAGAGTGTTTCAACGGTAAATGAACGAGACCAACTCCTTCGCATGGTGAAGAGCCTGAATCCAAAACTTGTCACCGTTGTTGAACAAGATATGAACACCAACACCCTTCCGTTTTTCCCAAGATTTGTTGAAGCCTACAATTACTACTCAGCCGTGTTTGAGTCGCTGGACGCGACTCTTCCCAGAGATAGTCAGGATAGGATGAATGTTGAAAGGCAATGCCTAGCAAGAGACATTGTCAATATTATTGCGTGCGAAGGTGAGGATAGGATTGAACGTTATGAAGTTGCTGGAAAATGGAGGGCAAGGATGATAATGGCTGGCTTCACTACATCCCCGATGAGTGCCAATGTGACCGACGCAATTAAGGAACTCATTAAGCAGTATTGTGACAGGTACAAGATGAACGACGTGATGGGGGCACTTCATTTTGGGTGGGAAGACAAGAACTTGATTGTTGCTTCAGCATGGAGGTGA 1740 0.4489 MSLVRSAELPATPYRNAKLYSIKGTDVRPGFPSQIFGPDKHRTMYITDSYSSESYEKYFHNSPTEELIETPTSSISGSSLPDGSSYPVRASSGASVAANNPFDISLVSTRHGDACRSNFGSDFLENGSPDPLDFDDQMKLKLQELERTLLGDNNDDYEEDFILGTFQSMDIDAEWAEPIQNMPHHGSPKESSSSDSNHSIISSISPRTPKQLLLECAGVISEGNAEEASSMINELRQMVSIQGDPPQRIAAYMVEGLAARIAESGSSIYKALKCKEPPSSDRLAAMQILFEVCPCFKFGFIAANGAITEAVQDEKKVHIVDFDINQGNQYITLIQALASTTVKPPHVRLTGVDDPESVQRSVGGLKIIGQRLEKLAEILGLPFEFRAVASRSSLVTPSMLDCRPGEALVVNFAFQLHHMQDESVSTVNERDQLLRMVKSLNPKLVTVVEQDMNTNTLPFFPRFVEAYNYYSAVFESLDATLPRDSQDRMNVERQCLARDIVNIIACEGEDRIERYEVAGKWRARMIMAGFTTSPMSANVTDAIKELIKQYCDRYKMNDVMGALHFGWEDKNLIVASAWR 579
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele27g1870 579 MobiDBLite consensus disorder prediction 69 92 - -
Lele27g1870 579 MobiDBLite consensus disorder prediction 185 203 - -
Lele27g1870 579 Pfam GRAS domain family 210 579 IPR005202 -
Lele27g1870 579 MobiDBLite consensus disorder prediction 179 203 - -
Lele27g1870 579 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 189 574 IPR005202 -
Lele27g1870 579 ProSiteProfiles GRAS family profile. 200 579 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele27g1870 Lele-ChrLele27 23458958 23460697 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele27g1870 1 579 GRAS Transcription Factor Family AT1G21450 62.162 0.0 711
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Lele27g1870 GRAS 1.6e-134 CL0063
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g0215 25 1275162 1276901 Lele27g1870 27 23458958 23460697 hybridization
Lele26g0229 26 1321818 1323557 Lele27g1870 27 23458958 23460697 hybridization