Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele27g1869 ATGGAAGATTCTAATTTTGCTGCAACTGCTTCATCGGCAGGCGATCAGGACTCTAAGACTTGTCCTCGCGGTCACTGGAGGCCGGCCGAGGATGAAAAGCTTCGGCAACTTGTTGAACAGTATGGTGCCCAGAACTGGAATTCAATTGCTGAGAAGCTCCAAGGAAGATCAGGGAAAAGTTGCAGATTAAGGTGGTTTAATCAGCTTGATCCGAGGATTAACAGGAGGCCATTTACAGAAGAAGAGGAAGAGAGGTTACTGGCAGCTCACCGCGTTCATGGTAACAAGTGGGCACTGATAGCGAGGCTTTTTCCAGGTCGAACTGATAACGCCGTGAAGAATCACTGGCATGTTATTATGGCACGAAAGCAAAGAGAGCAATCCAAGCAGTTAAGTGGCAAGAGGGTCTTCCAAGATGTTTACAATGATTCTTCAAGTAACACTTCCTCTTCTAATAAAAGATCAAAATCTCAAGATGTCTTTACTTCCCAAACCTTCTTTGACTTCCGGAACATCGACAAAAGTAGAATTATTGCAGAATATTCTCCCTCCATCTCTTTGGCTTCTTGGAATTTCTCATCCATGGCGAAGCAAGGAAAAGATAATAGTTACTTCAACCCCTGCTTTAACATTTACTTCTCAGAATGTTCAAAAGGTTCGGATAAATATCTCTACAGAATTTTTCCAAATTCTGCATCATCGTACGGCAGCATTCTACCAAACTACAAGAAGGTTGTTCCTGGTCCTTACGGATCATCAGTCTTTGGTTGTGATGGTGTCGATGAGAGGAATAAGACAATAAATAAGGACTTGACGAATCTAAGCAACATCTCACCCACATTTGCAAAGAAGAGGACTTCTGTGGAGCAAGAGCAAGCAGATAATCAGAAAGAAGTTCCCTTCATTGATTTTCTGGGCGTGGGAGTGTCATCGTCATGA 939 0.4302 MEDSNFAATASSAGDQDSKTCPRGHWRPAEDEKLRQLVEQYGAQNWNSIAEKLQGRSGKSCRLRWFNQLDPRINRRPFTEEEEERLLAAHRVHGNKWALIARLFPGRTDNAVKNHWHVIMARKQREQSKQLSGKRVFQDVYNDSSSNTSSSNKRSKSQDVFTSQTFFDFRNIDKSRIIAEYSPSISLASWNFSSMAKQGKDNSYFNPCFNIYFSECSKGSDKYLYRIFPNSASSYGSILPNYKKVVPGPYGSSVFGCDGVDERNKTINKDLTNLSNISPTFAKKRTSVEQEQADNQKEVPFIDFLGVGVSSS 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele27g1869 312 Gene3D - 23 74 - -
Lele27g1869 312 Pfam Myb-like DNA-binding domain 26 86 - -
Lele27g1869 312 MobiDBLite consensus disorder prediction 1 18 - -
Lele27g1869 312 MobiDBLite consensus disorder prediction 1 27 - -
Lele27g1869 312 SUPERFAMILY Homeodomain-like 22 116 IPR009057 -
Lele27g1869 312 ProSiteProfiles Myb-like domain profile. 23 69 IPR001005 -
Lele27g1869 312 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 18 69 IPR017930 -
Lele27g1869 312 SMART sant 22 71 IPR001005 -
Lele27g1869 312 SMART sant 74 122 IPR001005 -
Lele27g1869 312 CDD SANT 86 117 IPR001005 -
Lele27g1869 312 Gene3D - 77 137 - -
Lele27g1869 312 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 70 124 IPR017930 -
Lele27g1869 312 FunFam MYB transcription factor 23 74 - -
Lele27g1869 312 ProSiteProfiles Myb-like domain profile. 70 120 IPR001005 -
Lele27g1869 312 PANTHER MYB PROTEIN-RELATED 23 154 - -
Lele27g1869 312 CDD SANT 26 67 IPR001005 -
Lele27g1869 312 FunFam MYB transcription factor 76 153 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele27g1869 Lele-ChrLele27 23444478 23445689 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele27g1869 21 129 MYB Transcription Factor Family AT1G17950 83.486 1.96e-67 209
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lele27g1869 Myb_DNA-bind_6 2.1e-17 CL0123