Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele27g1862 ATGATCCACAGAATCCTATATTACCTAATATTAAAAATTCTAACACGGGGTGCCACTGGGGTTAGCATTGAAGTCAAGGTCACCGCAGATGTCCCGGATCACAAGCCTGTCTATTCTCTGTCCCATGGTCATAATTTTGAAGACCTCGAGCATTCTATCATCTCTTGCACAAGTTATCCCTCATCTTCTATCCTTCATGATACCTCTGATTTGCTCCACGGCTATACAAAACGTTCAAATGCTGGCAGGTCACGAGAGAACATTTCTTCATCAGATTTTGGATCTTCTTCTAAGCCAGAAAAATCAGGTATAAGCCCCAAGGGTGAATACGAAGATCCCATTACTTTACACATAACCCAGAAGCAAAACAAATATGGCATTCTTTCAAAATCTTCAGATGCACCAATCCTTTTGTACAAGGGCGTGCTTAGAGACGGACAGCAAATTGCGGCCAAGGTGAGAAAGGAAGAAAGCAGGCAAGGGTTTTCTGAGTTCAATTCTGAGATTTATGTCTTAAGTTTTGCTCGACACAAGAATATAGTGATGCTGCTAGGTTACTGTTGCAAGGAAAGCCAAAATATTCTGGTGTACGAATATATTTGCAATAAGTCTCTTCACTGGCATCTGTATGGTGATTTTGGTCTCGCCAAATGGAAGACGGGTGATGAGACTCTGCGAACAAGGATAATGGGCACATTAGGATACTTTGCTCCGGAGTATGATGAGGATGGCATTGTTTCTGTGAGGACAGATGTGTATGCGTACGGCATCGTTCTGTTACAATTGATGTCAGGACGTAAGGCCGATCCATTAATTGAGAAGTTGGCTTTAAGTGAACTGGTTGACGCCCGTCTTGGGGAATCGTATGACACGAGAGAATTATACCTCATGGCCAAAGCAGCATACTTTTGTGTCCAAAGAGACCCCGGGATGAGACCATCCATGGGAGAGGTCGTGCGACTCCTTGAGGGAGAACCCGCCCACTTCGCCACTTGGGAGATAAATTTGAACCAACTTGGTTTCAAGGGGAGAAAATTCTTGGCTTCTCATCATTGCGAATCCGACGTCGAAAGCCCCCCCTTTTACACAGGATGTAATGTTACAGGTGTAATTTGGGCGAGGTTGAGAGCTTATATTCTTCTTCACCGTATCATAAGCGCACCGCACTCATGCAGTGTAACATCTGGAGATTAG 1194 0.4422 MIHRILYYLILKILTRGATGVSIEVKVTADVPDHKPVYSLSHGHNFEDLEHSIISCTSYPSSSILHDTSDLLHGYTKRSNAGRSRENISSSDFGSSSKPEKSGISPKGEYEDPITLHITQKQNKYGILSKSSDAPILLYKGVLRDGQQIAAKVRKEESRQGFSEFNSEIYVLSFARHKNIVMLLGYCCKESQNILVYEYICNKSLHWHLYGDFGLAKWKTGDETLRTRIMGTLGYFAPEYDEDGIVSVRTDVYAYGIVLLQLMSGRKADPLIEKLALSELVDARLGESYDTRELYLMAKAAYFCVQRDPGMRPSMGEVVRLLEGEPAHFATWEINLNQLGFKGRKFLASHHCESDVESPPFYTGCNVTGVIWARLRAYILLHRIISAPHSCSVTSGD 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele27g1862 397 ProSiteProfiles Protein kinase domain profile. 1 331 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele27g1862 397 MobiDBLite consensus disorder prediction 81 102 - -
Lele27g1862 397 PANTHER OS01G0750732 PROTEIN 89 209 - -
Lele27g1862 397 MobiDBLite consensus disorder prediction 77 110 - -
Lele27g1862 397 Pfam Protein tyrosine and serine/threonine kinase 145 209 IPR001245 GO:0004672|GO:0006468
Lele27g1862 397 Pfam Protein tyrosine and serine/threonine kinase 211 322 IPR001245 GO:0004672|GO:0006468
Lele27g1862 397 Gene3D Transferase(Phosphotransferase) domain 1 210 337 - -
Lele27g1862 397 Gene3D Phosphorylase Kinase; domain 1 137 200 - -
Lele27g1862 397 SUPERFAMILY Protein kinase-like (PK-like) 139 331 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele27g1862 Lele-ChrLele27 23414475 23424044 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele27g1862 138 323 Trihelix Transcription Factor Family AT5G38560 33.080 6.37e-36 137
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-2 Lele27g1862 PK_Tyr_Ser-Thr 8e-08 CL0016