Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele27g1858 ATGTCCTTAAAATTGGAGACCGAGAGATCAGTGAGGACTAATACCCTGATTTGGTGTGTAATTATGACGTTAAGCGGTGTAATCACATTGAGCTTGTTCATAGTTGCAGCAGCGACTGTTACGTCGGTGGCGGGTCAGGCCAAGCCCGGTTGCAGCGGCGCGTGCGGCGACCTTAACATCCCGTACCCATTCGGTACAAGAGAAGGGTGCTATAGAGATGAAAATTTCTTCATATCTTGCCACACCGGTACCTCTCCTGCTAAACCAACTGCAAATTACTCCAGTACCAACATTCAGGTGTTGCACATCTCTCTGGATGGTCAGTTACGCCTCTCCGGCTGGGTCGGCTGGGATTGTTACGTTCCCTCTGCTCACCGGAACTTCATATACTTTAAACTCCGTTTGTTTGCTATATCCAACACCAAGAACAAGTTCACGGTCATTGGCTGCGACACCTACGCTTTCATGAATGATTTTTGGGGAAGAAGGTTCTCCACTGGCTGTACCTCCACTTGCAGTGACGTAGCCGACCTGAACAATGGAAGTTGCTCTGGTATTGGTTGTTGCCAAACCAGTTTTCCCACAGGAAACATGGGTTACAACATCAGCATATACAGCTATCGCAACCACTCTCGAGTGTTGGAGTTTAATCCTTGCAGCTATGCTTTTGTGGTCGAAGACGGTGCTTTCAATTTCTCTTCTCTAGATCTCGTAGATCTGCGAGGCAAAAGAGATTTTCCTATGATCATTGATTGGGCCATTTGGGATGAGAATTGCTCCGAAGCAATCAAGAACAGAAGCAGCTATGCTTGCATGGACAACAGCTTCTGCGTGGATTCACAAAATGCTCCCGGCTACCTCTGCAGATGCAAAAGAGGGTTTCGAGGGAATCCTTACCTGTCTGGTTCTGATGGTTGCCAAGAGTGTTATGTCTACAAACTTGCAGACATCGACGAGTGCAGCAACAGCACATTAAATCTCTGCAGTCAAAAGTGCAACAATCTGTACGGCACCTACAATTGTTCTTGCCTCCCGGGATACGAAGGCAATGGTTTCAAGAACGGAACGGGATGTGTTTTAGAGGATAAATCCAACAATGTCCCAATCACTGAAGTTGCTTTAGGCATCAGCGTATCCCTCTTGGCTCTTGGAATTGTCATATCCTCCTTATGTTGGGTGGGAAGGAAAAGAAAGCTCGTAAACATCAGAAATAAGTTCTTCGAGAAAAACGGCGGTCTCATGCTTCAGGAACAACTTTCCGAGCGACATGGTTACAATGAAATGGCAAAGCTATTTACCGAAGAGGAGCTCAAAGAAGCCACAGATAACTTCCATGAAAGCAAAATTATTGGGCGTGGAGGCCAAGGAACAGTTTACAAAGGAACATTACCAGATAAAAGAGTGGTTGCCATTAAGAAGTCCAGAATAGCAGAGCAAAGCCAAGTCAGGGATTTCATCAACGAAGTTCTTGTGCTCTCACAAATCAACCACAGGAATGTGGTCAAACTTCTTGGTTGTTGTTTGGAAACTGAAGTTCCTCTGCTAGTTTATGAGTTCGTCCCTAATAATACTCTGCTTCACCATATAGACCCATTAATGAAAACATCATGTCTTCCATGGGAAACTCGGTTAAGGGTAGCTGCTGAAACTGCTGGAGCCATATCGTACCTTCATTCTGCAGCTTCCATTTCAATCGTTCACAGGGATATAAAGTCTACCAACATACTCTTGGATCACAATTACACAGCAAAGGTATCTGATTTTGGAGCCTCCAGGTTGGTTCCTCTAGACCAGACTGAAATCACTACACTTGTGCAAGGGACATTGGGATACTTGGACCCTGAGTACCTACAAACCAGCCAATTAACCGAGAAAAGCGATGTTTATAGCTTCGGGGTGGTGCTTATGGAGTTGTTAACTGGAAAGAAGGTGGTTGAAATGAACAGGCCAGAAGAAGACAGAAATTTAGCTATGTACTTTGTTTCTTCAATGAAGAAAGACCGTTTGCTTGACATTCTAGATAGTAGAGTGTTGGATGAGAAAAATGTAGGGCAACTTGAGGAAGTTGCTGTATTGGCGAGTAGATGTATAAGAGTGAAGGGGGAAGAGAGGCCAACCATGAAGGAAGTATCAATTGAGCTAGAAGGTCTGATAGCTATGGAAAAGCATCCGTGGGATGGAAAATATTTAAATTCCGAGGAAGCTGAATACTTGCTTGCTCCAATATATGGAACTGAAGGCAGTACTAGCAACTCCGTGGGGTTTGAAAGCATAGGGAACCAACTTGCACTTGAGATGGGAAGTGGACGCTGA 2313 0.4488 MSLKLETERSVRTNTLIWCVIMTLSGVITLSLFIVAAATVTSVAGQAKPGCSGACGDLNIPYPFGTREGCYRDENFFISCHTGTSPAKPTANYSSTNIQVLHISLDGQLRLSGWVGWDCYVPSAHRNFIYFKLRLFAISNTKNKFTVIGCDTYAFMNDFWGRRFSTGCTSTCSDVADLNNGSCSGIGCCQTSFPTGNMGYNISIYSYRNHSRVLEFNPCSYAFVVEDGAFNFSSLDLVDLRGKRDFPMIIDWAIWDENCSEAIKNRSSYACMDNSFCVDSQNAPGYLCRCKRGFRGNPYLSGSDGCQECYVYKLADIDECSNSTLNLCSQKCNNLYGTYNCSCLPGYEGNGFKNGTGCVLEDKSNNVPITEVALGISVSLLALGIVISSLCWVGRKRKLVNIRNKFFEKNGGLMLQEQLSERHGYNEMAKLFTEEELKEATDNFHESKIIGRGGQGTVYKGTLPDKRVVAIKKSRIAEQSQVRDFINEVLVLSQINHRNVVKLLGCCLETEVPLLVYEFVPNNTLLHHIDPLMKTSCLPWETRLRVAAETAGAISYLHSAASISIVHRDIKSTNILLDHNYTAKVSDFGASRLVPLDQTEITTLVQGTLGYLDPEYLQTSQLTEKSDVYSFGVVLMELLTGKKVVEMNRPEEDRNLAMYFVSSMKKDRLLDILDSRVLDEKNVGQLEEVAVLASRCIRVKGEERPTMKEVSIELEGLIAMEKHPWDGKYLNSEEAEYLLAPIYGTEGSTSNSVGFESIGNQLALEMGSGR 770
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele27g1858 770 Gene3D Laminin 316 360 - -
Lele27g1858 770 CDD STKc_IRAK 450 717 - -
Lele27g1858 770 FunFam Wall-associated receptor kinase 2 520 737 - -
Lele27g1858 770 SUPERFAMILY Protein kinase-like (PK-like) 427 716 IPR011009 -
Lele27g1858 770 SMART serkin_6 444 718 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele27g1858 770 SMART egfca_6 316 359 IPR001881 GO:0005509
Lele27g1858 770 SMART egfca_6 256 307 IPR001881 GO:0005509
Lele27g1858 770 CDD EGF_CA 316 349 - -
Lele27g1858 770 Pfam Calcium-binding EGF domain 316 351 IPR001881 GO:0005509
Lele27g1858 770 ProSitePatterns Serine/Threonine protein kinases active-site signature. 565 577 IPR008271 GO:0004672|GO:0006468
Lele27g1858 770 ProSitePatterns Calcium-binding EGF-like domain signature. 316 341 IPR018097 GO:0005509
Lele27g1858 770 SMART egf_5 258 307 IPR000742 -
Lele27g1858 770 SMART egf_5 319 359 IPR000742 -
Lele27g1858 770 Pfam Wall-associated receptor kinase galacturonan-binding 51 109 IPR025287 GO:0030247
Lele27g1858 770 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 40 717 IPR045274 GO:0007166
Lele27g1858 770 FunFam Fibrillin 2 311 354 - -
Lele27g1858 770 Gene3D Phosphorylase Kinase; domain 1 410 519 - -
Lele27g1858 770 Gene3D Transferase(Phosphotransferase) domain 1 520 732 - -
Lele27g1858 770 FunFam Wall-associated receptor kinase 2 414 519 - -
Lele27g1858 770 SUPERFAMILY EGF/Laminin 316 351 - -
Lele27g1858 770 ProSiteProfiles Protein kinase domain profile. 444 726 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele27g1858 770 ProSitePatterns Aspartic acid and asparagine hydroxylation site. 332 343 IPR000152 -
Lele27g1858 770 ProSiteProfiles EGF-like domain profile. 316 353 IPR000742 -
Lele27g1858 770 Pfam Protein kinase domain 444 710 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele27g1858 Lele-ChrLele27 23389525 23392171 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele27g1858 22 770 Receptor kinase-like Gene Family AT1G21230 46.842 0.0 637
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Lele27g1858 Pkinase 1e-47 CL0016